RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 BROXQ5VW32 411 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 PHACTR4Q8IZ21 702 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 ZNF567Q8N184 647 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 CBARPQ8N350 705 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 FSTL5Q8N475 847 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 TTC13Q8NBP0 860 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 ZNF248Q8NDW4 579 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 LPCAT1Q8NF37 534 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 TRIB3Q96RU7 358 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 UBL7Q96S82 380 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 LYSMD1Q96S90 227 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 FAM118BQ9BPY3 351 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 CARD9Q9H257 536 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 MBNL1Q9NR56 388 aaKnown RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 KLHL8Q9P2G9 620 aaPredicted RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 MYLKQ15746 1914 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 DSPP15924 2871 aaKnown RBP12.77□□□□□ -0.37
CCDC57-211ENST00000578187 NBEAQ8NFP9 2946 aa12.77□□□□□ -0.37
CCDC57-211ENST00000578187 TCRBV7S2A1N4TA0A589 114 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 A8MX80 341 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
CCDC57-211ENST00000578187 RECQL5O94762 991 aaPredicted RBP12.76□□□□□ -0.37
CCDC57-211ENST00000578187 MT-CYBP00156 380 aaPredicted RBP12.76□□□□□ -0.37
CCDC57-211ENST00000578187 GIMD1P0DJR0 217 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 EPHB1P54762 984 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 GABREP78334 506 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 EIF2B5Q13144 721 aaKnown RBP12.76□□□□□ -0.37
CCDC57-211ENST00000578187 PTPRRQ15256 657 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 ELOCQ15369 112 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 QPCTQ16769 361 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 TPRG1LQ5T0D9 272 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 CDCP2Q5VXM1 449 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 EFL1Q7Z2Z2 1120 aaKnown RBP12.76□□□□□ -0.37
CCDC57-211ENST00000578187 TSPAN33Q86UF1 283 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 REXO1L1PQ8IX06 675 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 SPATA22Q8NHS9 363 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 SLC35B2Q8TB61 432 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 SMIM14Q96QK8 99 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 FCRL5Q96RD9 977 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 TLR10Q9BXR5 811 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 C10orf88Q9H8K7 445 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 POLR1BQ9H9Y6 1135 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 THSD1Q9NS62 852 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 DNPEPQ9ULA0 475 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 R3HDM2Q9Y2K5 976 aaKnown RBP12.76□□□□□ -0.37
CCDC57-211ENST00000578187 PCDHB1Q9Y5F3 818 aa12.76□□□□□ -0.37
CCDC57-211ENST00000578187 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-211ENST00000578187 EME2A4GXA9 379 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-211ENST00000578187 ANKRD66B4E2M5 251 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 LMO7DNF2Z398 122 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 TCEA3O75764 348 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 MPOP05164 745 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 MYF5P13349 255 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 ZNF30P17039 623 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 RBMS1P29558 406 aaKnown RBP12.75□□□□□ -0.37
CCDC57-211ENST00000578187 LSSP48449 732 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 UCNP55089 124 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 CCDC173Q0VFZ6 552 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 MTM1Q13496 603 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 ARHGEF7Q14155 803 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 GALNT3Q14435 633 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 ACOX1Q15067 660 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 SOWAHCQ53LP3 525 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-211ENST00000578187 C6orf132Q5T0Z8 1188 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 LRRC66Q68CR7 880 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 CRTC1Q6UUV9 634 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 KDELC1Q6UW63 502 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 RBM44Q6ZP01 1051 aaKnown RBP12.75□□□□□ -0.37
CCDC57-211ENST00000578187 HSD11B1LQ7Z5J1 315 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 SLC13A5Q86YT5 568 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-211ENST00000578187 RAVER1Q8IY67 606 aaKnown RBP12.75□□□□□ -0.37
CCDC57-211ENST00000578187 SDR16C5Q8N3Y7 309 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 DTD2Q96FN9 168 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 FCRL3Q96P31 734 aaPredicted RBP12.75□□□□□ -0.37
CCDC57-211ENST00000578187 BOCQ9BWV1 1114 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 ADGRE3Q9BY15 652 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 GBA3Q9H227 469 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 KCTD5Q9NXV2 234 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 KLF15Q9UIH9 416 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 CELSR3Q9NYQ7 3312 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
CCDC57-211ENST00000578187 LY6G6EA0A0G2JKS1 128 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 KCNN4O15554 427 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 RASGRP1O95267 797 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 ITPKBP27987 946 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 HK3P52790 923 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 STC1P52823 247 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 CDK18Q07002 472 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 PCSK7Q16549 785 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 ITPRIPL1Q6GPH6 555 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 GUSBP11Q6P575 273 aa12.74□□□□□ -0.37
CCDC57-211ENST00000578187 DARS2Q6PI48 645 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms