RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 HOXC11O43248 304 aaPredicted RBP28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 ATP5BP06576 529 aaKnown RBP28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 RBP1P09455 135 aa28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 GLRBP48167 497 aa28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 AARS2Q5JTZ9 985 aaKnown RBP28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 PPP4R1Q8TF05 950 aa28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 RSPRY1Q96DX4 576 aa28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 MYLK2Q9H1R3 596 aa28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 DUS2Q9NX74 493 aaKnown RBP28.36■■■□□ 2.13
CTDNEP1-210ENST00000574322 A0A1W2PQ67 120 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 LYPLA1O75608 230 aaPredicted RBP28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ALPIP09923 528 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 CCDC166P0CW27 439 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 CTPS1P17812 591 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ARRB2P32121 409 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 GKP32189 559 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ADARP55265 1226 aaKnown RBP28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ASPHQ12797 758 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 CSHL1Q14406 222 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 EML3Q32P44 896 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 TECRLQ5HYJ1 363 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 TMEM215Q68D42 235 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 KLC3Q6P597 504 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 TMEM207Q6UWW9 146 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 NAPRTQ6XQN6 538 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ATG14Q6ZNE5 492 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 NPAS3Q8IXF0 933 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 GATA5Q9BWX5 397 aaPredicted RBP28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 SUV39H2Q9H5I1 410 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ZFYVE1Q9HBF4 777 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 SLCO3A1Q9UIG8 710 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 C2orf16Q68DN1 1984 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 NDUFS3O75489 264 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 CYP17A1P05093 508 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 PRSS56P0CW18 603 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 HNF1BP35680 557 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 SKIV2L2P42285 1042 aaKnown RBP28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 RAD51Q06609 339 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 HSF5Q4G112 596 aaPredicted RBP28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 WDR75Q8IWA0 830 aaKnown RBP28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 PIANPQ8IYJ0 282 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 RYBPQ8N488 228 aaPredicted RBP28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ERP27Q96DN0 273 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 FAM96AQ9H5X1 160 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 STN1Q9H668 368 aaKnown RBP28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ERVW-1Q9UQF0 538 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 DNAJC16Q9Y2G8 782 aa28.35■■■□□ 2.13
CTDNEP1-210ENST00000574322 ZNF106Q9H2Y7 1883 aaKnown RBP28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 DLX3O60479 287 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 DNAJC8O75937 253 aaPredicted RBP28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 SLC4A1P02730 911 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 CISD3P0C7P0 127 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 ALOX15P16050 662 aaPredicted RBP28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 POLR2EP19388 210 aaKnown RBP28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 CCNHP51946 323 aaPredicted RBP28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 DNAJB13P59910 316 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 CACNG1Q06432 222 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 PSAPL1Q6NUJ1 521 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 ZSWIM9Q86XI8 627 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 CBARPQ8N350 705 aaPredicted RBP28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 MAFAQ8NHW3 353 aaPredicted RBP28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 ANKRD49Q8WVL7 239 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 SKA1Q96BD8 255 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 ASB16Q96NS5 453 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 BPIFA1Q9NP55 256 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 OBP2AQ9NY56 170 aa28.34■■■□□ 2.13
CTDNEP1-210ENST00000574322 PTPN5P54829 565 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 PFKPQ01813 784 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 FAM78AQ5JUQ0 283 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 DPY19L3Q6ZPD9 716 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 SPATA6LQ8N4H0 392 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 GRIN3AQ8TCU5 1115 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 WFIKKN2Q8TEU8 576 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 SMARCD2Q92925 531 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 SCRN2Q96FV2 425 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 MRGPRX3Q96LB0 322 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 DRC3Q9H069 523 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 WWP1Q9H0M0 922 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 UBE2ZQ9H832 354 aaPredicted RBP28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 TRPV4Q9HBA0 871 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 HEY2Q9UBP5 337 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 SLC27A6Q9Y2P4 619 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 COMMD10Q9Y6G5 202 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 SCN8AQ9UQD0 1980 aa28.33■■■□□ 2.13
CTDNEP1-210ENST00000574322 ADH1CP00326 375 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 ADH5P11766 374 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 FSHRP23945 695 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 ATP5F1P24539 256 aaPredicted RBP28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 CERS6Q6ZMG9 384 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 MTDHQ86UE4 582 aaKnown RBP28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 CCDC126Q96EE4 140 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 MSLNLQ96KJ4 702 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 BIRC8Q96P09 236 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 MCCC1Q96RQ3 725 aaPredicted RBP28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 GDE1Q9NZC3 331 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 HAO1Q9UJM8 370 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 MED16Q9Y2X0 877 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 ZNF37AP17032 561 aaPredicted RBP28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 LIG3P49916 1009 aa28.32■■■□□ 2.12
CTDNEP1-210ENST00000574322 CDKN1CP49918 316 aaPredicted RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms