RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 HSD11B1LQ7Z5J1 315 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 CTAGE6Q86UF2 777 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 CTAGE4Q8IX94 777 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 TTC30BQ8N4P2 665 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 MMGT1Q8N4V1 131 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 CEP112Q8N8E3 955 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 NAT8LQ8N9F0 302 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 NOA1Q8NC60 698 aaKnown RBP12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 OR52K1Q8NGK4 314 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 KLK6Q92876 244 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 KLF6Q99612 283 aaPredicted RBP12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 SLC17A9Q9BYT1 436 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 TRABDQ9H4I3 376 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 CASS4Q9NQ75 786 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 HACD3Q9P035 362 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 COQ6Q9Y2Z9 468 aa12.86□□□□□ -0.35
CNEP1R1-211ENST00000569647 C1orf232A0A0U1RR37 186 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 AURKAO14965 403 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 VILLO15195 856 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 CBFA2T3O75081 653 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 TM7SF2O76062 418 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 CLDN7O95471 211 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 SPINK2P20155 84 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 MRPS25P82663 173 aaKnown RBP12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 CDH17Q12864 832 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 TRIP6Q15654 476 aaKnown RBP12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 SETMARQ53H47 684 aaPredicted RBP12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 DBX2Q6ZNG2 339 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 TMC3Q7Z5M5 1100 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 RAVER1Q8IY67 606 aaKnown RBP12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 SERAC1Q96JX3 654 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 LENG8Q96PV6 779 aaPredicted RBP12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 CARD6Q9BX69 1037 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 ZFYVE1Q9HBF4 777 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 PIH1D1Q9NWS0 290 aaKnown RBP12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 PCOLCE2Q9UKZ9 415 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 SHOC2Q9UQ13 582 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 DMTF1Q9Y222 760 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 PCDHGB2Q9Y5G2 931 aa12.85□□□□□ -0.35
CNEP1R1-211ENST00000569647 A0A1W2PR77 199 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 EFCAB8A8MWE9 144 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 H0Y8X5 98 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 WNT9AO14904 365 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 RAD51BO15315 384 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 TP73O15350 636 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 SLC31A1O15431 190 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 RECQL5O94762 991 aaPredicted RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 SEC31AO94979 1220 aaKnown RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 PAK4O96013 591 aaPredicted RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 WNT1P04628 370 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 HNRNPA2B1P22626 353 aaKnown RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 CD38P28907 300 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 RPL21P46778 160 aaKnown RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 TERF1P54274 439 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 C21orf59P57076 290 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 SGCGQ13326 291 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 ZNF423Q2M1K9 1284 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 WSCD2Q2TBF2 565 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 IZUMO3Q5VZ72 239 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 DUPD1Q68J44 220 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 C8orf74Q6P047 294 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 PPP1R21Q6ZMI0 780 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 RFLNAQ6ZTI6 216 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 TECPR1Q7Z6L1 1165 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 PCGF5Q86SE9 256 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 HOOK3Q86VS8 718 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 TP53I13Q8NBR0 393 aaPredicted RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 TMEM145Q8NBT3 493 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 MCUQ8NE86 351 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 DENND6BQ8NEG7 585 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 BRSK1Q8TDC3 778 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 BLOC1S5Q8TDH9 187 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 SETD7Q8WTS6 366 aaKnown RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 CENPTQ96BT3 561 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 DTD2Q96FN9 168 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 SNF8Q96H20 258 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 SCNM1Q9BWG6 230 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 GPR63Q9BZJ6 419 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 FZD3Q9NPG1 666 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 AASDHPPTQ9NRN7 309 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 DSPP15924 2871 aaKnown RBP12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 KNTC1P50748 2209 aa12.84□□□□□ -0.35
CNEP1R1-211ENST00000569647 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.35
CNEP1R1-211ENST00000569647 BHMG1C9JSJ3 638 aaPredicted RBP12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 PRAMEF26H0Y7S4 382 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 FLRT2O43155 660 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 LDB2O43679 373 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 HYAL3O43820 417 aaPredicted RBP12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 LZTS3O60299 673 aaPredicted RBP12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 MLNP12872 115 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 TPH1P17752 444 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 IGFALSP35858 605 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 HMGCLP35914 325 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 ETV3P41162 512 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 MAGEA3P43357 314 aa12.83□□□□□ -0.36
CNEP1R1-211ENST00000569647 SPINT3P49223 89 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms