RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 KIAA0930Q6ICG6 404 aaPredicted RBP23.38■■□□□ 1.33
RAB40C-212ENST00000569575 RABEPKQ7Z6M1 372 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 FRMD1Q8N878 549 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 AP2M1Q96CW1 435 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 TTC25Q96NG3 672 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 SMIM14Q96QK8 99 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 HINFPQ9BQA5 517 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 ZC3H7BQ9UGR2 993 aaKnown RBP23.38■■□□□ 1.33
RAB40C-212ENST00000569575 SUSD2Q9UGT4 822 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 NFU1Q9UMS0 254 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 RPS6KL1Q9Y6S9 549 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 LRRK1Q38SD2 2015 aa23.38■■□□□ 1.33
RAB40C-212ENST00000569575 CEP192Q8TEP8 1941 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 GLYATL1P3A0A0U1RQE8 302 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 MEI4A8MW99 385 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 PRR5-ARHGAP8B1AHC4 643 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 FPGTO14772 594 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 MAGEC1O60732 1142 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 HOXC4P09017 264 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-212ENST00000569575 GM2AP17900 193 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 PPARGP37231 505 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-212ENST00000569575 ELK3P41970 407 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 YPEL5P62699 121 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 SIM2Q14190 667 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-212ENST00000569575 PTPRRQ15256 657 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 ANKRD20A4Q4UJ75 823 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 MSS51Q4VC12 460 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 DENND2CQ68D51 928 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 IQCHQ86VS3 1027 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 DCP2Q8IU60 420 aaKnown RBP23.37■■□□□ 1.33
RAB40C-212ENST00000569575 ZBED8Q8IZ13 594 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 SKA1Q96BD8 255 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 KLF6Q99612 283 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-212ENST00000569575 TTC1Q99614 292 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 ABCG8Q9H221 673 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 IL26Q9NPH9 171 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 RAB21Q9UL25 225 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 INVSQ9Y283 1065 aa23.37■■□□□ 1.33
RAB40C-212ENST00000569575 SPAG17Q6Q759 2223 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 BCKDHBP21953 392 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 TRIM23P36406 574 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 MAGEA4P43358 317 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 RACK1P63244 317 aaKnown RBP23.36■■□□□ 1.33
RAB40C-212ENST00000569575 PRAMEP78395 509 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 SEMG2Q02383 582 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 ILF2Q12905 390 aaKnown RBP23.36■■□□□ 1.33
RAB40C-212ENST00000569575 STEAP4Q687X5 459 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 AFTPHQ6ULP2 937 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 PALM2Q8IXS6 379 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 MPP5Q8N3R9 675 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 TP53I13Q8NBR0 393 aaPredicted RBP23.36■■□□□ 1.33
RAB40C-212ENST00000569575 TMEM145Q8NBT3 493 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 GPR26Q8NDV2 337 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 OR13J1Q8NGT2 312 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 CALML6Q8TD86 181 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.36■■□□□ 1.332e-6■■■■■ 54.9
RAB40C-212ENST00000569575 ULK4Q96C45 1275 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 HSPA12BQ96MM6 686 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 VPS35Q96QK1 796 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 SAYSD1Q9NPB0 183 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 SMOXQ9NWM0 555 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 SLC30A1Q9Y6M5 507 aa23.36■■□□□ 1.33
RAB40C-212ENST00000569575 THADAQ6YHU6 1953 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 SCN8AQ9UQD0 1980 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 AGAP14A8MT82 685 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 SLC31A1O15431 190 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 GNSP15586 552 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 ITGALP20701 1170 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 CRADDP78560 199 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 FGL2Q14314 439 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 STAT4Q14765 748 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 WSCD2Q2TBF2 565 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 LYPLAL1Q5VWZ2 237 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 LYSMD4Q5XG99 296 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 PNCKQ6P2M8 343 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 ADAMTSL4Q6UY14 1074 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 CERS6Q6ZMG9 384 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 SNX20Q7Z614 316 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 CNPY4Q8N129 248 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.35■■□□□ 1.33
RAB40C-212ENST00000569575 FBXO36Q8NEA4 188 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 OR13C4Q8NGS5 318 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 HEXDCQ8WVB3 486 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 DNAJC1Q96KC8 554 aaKnown RBP23.35■■□□□ 1.33
RAB40C-212ENST00000569575 EPC1Q9H2F5 836 aa23.35■■□□□ 1.33
RAB40C-212ENST00000569575 ZNF106Q9H2Y7 1883 aaKnown RBP23.34■■□□□ 1.33
RAB40C-212ENST00000569575 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 PFDN6O15212 129 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 SRP72O76094 671 aaKnown RBP23.34■■□□□ 1.33
RAB40C-212ENST00000569575 MAT2AP31153 395 aaKnown RBP23.34■■□□□ 1.33
RAB40C-212ENST00000569575 XIAPP98170 497 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 CACNG1Q06432 222 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 LONRF1Q17RB8 773 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 MAP9Q49MG5 647 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 AARS2Q5JTZ9 985 aaKnown RBP23.34■■□□□ 1.33
RAB40C-212ENST00000569575 EMBQ6PCB8 327 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 TRMT10CQ7L0Y3 403 aaKnown RBP23.34■■□□□ 1.33
RAB40C-212ENST00000569575 CCDC25Q86WR0 208 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 SLC41A1Q8IVJ1 513 aa23.34■■□□□ 1.33
RAB40C-212ENST00000569575 TMEFF1Q8IYR6 380 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms