RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 WDR92Q96MX6 357 aa14.47□□□□□ -0.09
COMMD4-225ENST00000569245 AGAP3Q96P47 875 aa14.47□□□□□ -0.09
COMMD4-225ENST00000569245 CEP41Q9BYV8 373 aa14.47□□□□□ -0.09
COMMD4-225ENST00000569245 WDR26Q9H7D7 661 aa14.47□□□□□ -0.09
COMMD4-225ENST00000569245 KLQ9UEF7 1012 aa14.47□□□□□ -0.09
COMMD4-225ENST00000569245 ASPMQ8IZT6 3477 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 TMEM8BA6NDV4 472 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 FAM187AA6NFU0 413 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 H7C0C1 242 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 RAD51CO43502 376 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 GCATO75600 419 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 RASGRP1O95267 797 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 GIMD1P0DJR0 217 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 CKMT1AP12532 417 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 TSHRP16473 764 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 LHCGRP22888 699 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 KELP23276 732 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 STIP1P31948 543 aaKnown RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ETV3P41162 512 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 CD86P42081 329 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ATP5OP48047 213 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 DUSP3P51452 185 aaPredicted RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 HK3P52790 923 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 CLDN6P56747 220 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 IFI35P80217 286 aaPredicted RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 DR1Q01658 176 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 NIPAL4Q0D2K0 466 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 PRKD1Q15139 912 aaPredicted RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ELOCQ15369 112 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ALG11Q2TAA5 492 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 TEX35Q5T0J7 233 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ALG1LQ6GMV1 187 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 CCDC70Q6NSX1 233 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ZCCHC8Q6NZY4 707 aaKnown RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 PNCKQ6P2M8 343 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 DARS2Q6PI48 645 aaKnown RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 SYDE1Q6ZW31 735 aaPredicted RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 HSD11B1LQ7Z5J1 315 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 TSPAN33Q86UF1 283 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ZC3H18Q86VM9 953 aaKnown RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 LPCAT1Q8NF37 534 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ARRDC2Q8TBH0 407 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 SCG3Q8WXD2 468 aaKnown RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 UBXN4Q92575 508 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 GLMNQ92990 594 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 FUBP1Q96AE4 644 aaKnown RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 QKIQ96PU8 341 aaKnown RBP eCLIP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 LRRC1Q9BTT6 524 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 LRRC61Q9BV99 259 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 TMEM121BQ9BXQ6 578 aaPredicted RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 TDRD1Q9BXT4 1180 aaKnown RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ABCG4Q9H172 646 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 PCDH9Q9HC56 1237 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 KCTD5Q9NXV2 234 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 NCKIPSDQ9NZQ3 722 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 MOSPD1Q9UJG1 213 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 PNMA8BQ9ULN7 279 aaPredicted RBP14.46□□□□□ -0.09
COMMD4-225ENST00000569245 ZNF148Q9UQR1 794 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 NEU2Q9Y3R4 380 aa14.46□□□□□ -0.09
COMMD4-225ENST00000569245 A0A0U1RQS6 177 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 LMO7DNF2Z398 122 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 TPP1O14773 563 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 YY2O15391 372 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 CTIFO43310 598 aaKnown RBP14.45□□□□□ -0.1
COMMD4-225ENST00000569245 FZD6O60353 706 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 ECEL1O95672 775 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 GAS8O95995 478 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 TNFP01375 233 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 GM2AP17900 193 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 E2F1Q01094 437 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 ZBTB17Q13105 803 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 FAM182AQ5T1J6 154 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 HES3Q5TGS1 186 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 LRRC66Q68CR7 880 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 ESRP1Q6NXG1 681 aaKnown RBP14.45□□□□□ -0.1
COMMD4-225ENST00000569245 CRTC1Q6UUV9 634 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 Q6ZVL8 140 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 FSTL5Q8N475 847 aaPredicted RBP14.45□□□□□ -0.1
COMMD4-225ENST00000569245 FAM181AQ8N9Y4 354 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 OR56A4Q8NGH8 313 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 TFB1MQ8WVM0 346 aaKnown RBP14.45□□□□□ -0.1
COMMD4-225ENST00000569245 ZCCHC14Q8WYQ9 949 aaKnown RBP14.45□□□□□ -0.1
COMMD4-225ENST00000569245 RTP4Q96DX8 246 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 DTD2Q96FN9 168 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 SMIM14Q96QK8 99 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 MCCC1Q96RQ3 725 aaPredicted RBP14.45□□□□□ -0.1
COMMD4-225ENST00000569245 TMEM121Q9BTD3 319 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 USP29Q9HBJ7 922 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 PPIL1Q9Y3C6 166 aa14.45□□□□□ -0.1
COMMD4-225ENST00000569245 TP53BP1Q12888 1972 aaPredicted RBP14.44□□□□□ -0.1
COMMD4-225ENST00000569245 SHROOM3Q8TF72 1996 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 A0A0J9YYE9 177 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 CPED1A4D0V7 1026 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 TMEM202A6NGA9 273 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 PSMD11O00231 422 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 TTI1O43156 1089 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 TRBC1P01850 177 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 TRIM23P36406 574 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 RPIAP49247 311 aa14.44□□□□□ -0.1
COMMD4-225ENST00000569245 KIAA1024LP59773 190 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms