RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	CDC25B	P30305	580 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	VAV2	P52735	878 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	COPS2	P61201	443 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	ADCY2	Q08462	1091 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	TCEA2	Q15560	299 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	KAZN	Q674X7	775 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	OGFOD3	Q6PK18	319 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	RFLNA	Q6ZTI6	216 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	TAF8	Q7Z7C8	310 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	CCDC50	Q8IVM0	306 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	GPR156	Q8NFN8	814 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	P3H4	Q92791	437 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	SCAMP4	Q969E2	229 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	GRAMD1A	Q96CP6	724 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	SCARF2	Q96GP6	870 aa	Predicted RBP	13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	TEKT5	Q96M29	485 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	CEP41	Q9BYV8	373 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	CARS2	Q9HA77	564 aa	Known RBP	13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	GLOD4	Q9HC38	313 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	IMPACT	Q9P2X3	320 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	SAE1	Q9UBE0	346 aa	Predicted RBP	13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	GULP1	Q9UBP9	304 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	CD84	Q9UIB8	345 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	MOSPD1	Q9UJG1	213 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	SLC17A4	Q9Y2C5	497 aa		13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	REXO2	Q9Y3B8	237 aa	Known RBP	13.8	□□□□□ -0.2
PKD1-231	ENST00000566784	ZFHX4	Q86UP3	3567 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	ZFYVE26	Q68DK2	2539 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	CS	O75390	466 aa	Known RBP	13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	IVL	P07476	585 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	CTNNA1	P35221	906 aa	Known RBP	13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	SPINT3	P49223	89 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	CDK18	Q07002	472 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	BBS12	Q6ZW61	710 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	TMEM139	Q8IV31	216 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	FAM46D	Q8NEK8	389 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	CCHCR1	Q8TD31	782 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	GPBAR1	Q8TDU6	330 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	KRT35	Q92764	455 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	HIC2	Q96JB3	615 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	VAT1	Q99536	393 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	BAG1	Q99933	345 aa	Predicted RBP	13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	CCDC3	Q9BQI4	270 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	GSDMC	Q9BYG8	508 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	PKD2L2	Q9NZM6	624 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	SIRPG	Q9P1W8	387 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	EFR3B	Q9Y2G0	817 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	RAX	Q9Y2V3	346 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	PCDHA3	Q9Y5H8	950 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	AK5	Q9Y6K8	562 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	DUSP10	Q9Y6W6	482 aa		13.79	□□□□□ -0.2
PKD1-231	ENST00000566784	CCDC66	A2RUB6	948 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	HACD1	B0YJ81	288 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	APOC4-APOC2	K7ER74	178 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	NTN3	O00634	580 aa	Predicted RBP	13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	NOBOX	O60393	691 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	APOC2	P02655	101 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	FUCA1	P04066	466 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	PTPN7	P35236	360 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	WASHC5	Q12768	1159 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	ILF3	Q12906	894 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	XRCC4	Q13426	336 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	GALNT3	Q14435	633 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	LLGL1	Q15334	1064 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	ISX	Q2M1V0	245 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	HENMT1	Q5T8I9	393 aa	Known RBP	13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	RBM44	Q6ZP01	1051 aa	Known RBP	13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	B4GALNT4	Q76KP1	1039 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	TXLNB	Q8N3L3	684 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	ACRBP	Q8NEB7	543 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	CCL4L1	Q8NHW4	92 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	KIAA1524	Q8TCG1	905 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	COX14	Q96I36	57 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	SRPK1	Q96SB4	655 aa	Known RBP	13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	AGAP2	Q99490	1192 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	RIOK2	Q9BVS4	552 aa	Known RBP	13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	LACRT	Q9GZZ8	138 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	CDH19	Q9H159	772 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	MAGEE1	Q9HCI5	957 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	SUFU	Q9UMX1	484 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	GPSM3	Q9Y4H4	160 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	PCDHB1	Q9Y5F3	818 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	ITPR1	Q14643	2758 aa		13.78	□□□□□ -0.2
PKD1-231	ENST00000566784	BRINP1	O60477	761 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	USP12	O75317	370 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	NDST3	O95803	873 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	MT-CYB	P00156	380 aa	Predicted RBP	13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	PNLIP	P16233	465 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	GLB1	P16278	677 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	CTNNA2	P26232	953 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	CD68	P34810	354 aa	Predicted RBP	13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	GNPDA1	P46926	289 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	NAP1L1	P55209	391 aa	Known RBP	13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	PEX6	Q13608	980 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	SPIDR	Q14159	915 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	C14orf28	Q4W4Y0	310 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	FAM182A	Q5T1J6	154 aa		13.77	□□□□□ -0.21
PKD1-231	ENST00000566784	CERCAM	Q5T4B2	595 aa		13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms