RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 XKR9Q5GH70 373 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 ARHGAP40Q5TG30 622 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 SCARA3Q6AZY7 606 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 HTR3DQ70Z44 454 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 NIPA1Q7RTP0 329 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 PEX26Q7Z412 305 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 HAUS6Q7Z4H7 955 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 ARHGEF19Q8IW93 802 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 GOLGA5Q8TBA6 731 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 RAET1EQ8TD07 263 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 PLEKHO2Q8TD55 490 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 WHAMMQ8TF30 809 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 SLC20A1Q8WUM9 679 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 DLG3Q92796 817 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 FOXRED1Q96CU9 486 aaPredicted RBP10.69□□□□□ -0.7
UBFD1-205ENST00000566136 IFT74Q96LB3 600 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 ACCSQ96QU6 501 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 TUBB6Q9BUF5 446 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 SCNM1Q9BWG6 230 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 ACSS2Q9NR19 701 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 PXMP2Q9NR77 195 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 PLA2G3Q9NZ20 509 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 RNF14Q9UBS8 474 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 GABRQQ9UN88 632 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 ST8SIA3O43173 380 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 RAD51CO43502 376 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 RB1P06400 928 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 VIMP08670 466 aaKnown RBP10.69□□□□□ -0.7
UBFD1-205ENST00000566136 VAMP7P51809 220 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 METTL13Q8N6R0 699 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 SHCBP1Q8NEM2 672 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 LMO3Q8TAP4 145 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 NCLNQ969V3 563 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 ARHGEF26Q96DR7 871 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 ATP6V1G3Q96LB4 118 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 UBE2TQ9NPD8 197 aaPredicted RBP10.69□□□□□ -0.7
UBFD1-205ENST00000566136 RNF146Q9NTX7 359 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 ABCB8Q9NUT2 735 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 STK39Q9UEW8 545 aa10.69□□□□□ -0.7
UBFD1-205ENST00000566136 DBR1Q9UK59 544 aaKnown RBP10.69□□□□□ -0.7
UBFD1-205ENST00000566136 TRAV6A0A075B6T7 132 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 FAM171A2A8MVW0 826 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 POP4O95707 220 aaKnown RBP10.68□□□□□ -0.7
UBFD1-205ENST00000566136 CD72P21854 359 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 IL1R2P27930 398 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 USP8P40818 1118 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 HK2P52789 917 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 MFAP4P55083 255 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 SLC9B1Q4ZJI4 515 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 SGO1Q5FBB7 561 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 C1orf220Q5T0J3 134 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 ADGRF2Q8IZF7 708 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 OR52K1Q8NGK4 314 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 AKR7LQ8NHP1 331 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 CASKIN2Q8WXE0 1202 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 SAAL1Q96ER3 474 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 HS6ST2Q96MM7 605 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 ADI1Q9BV57 179 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 DENND2DQ9H6A0 471 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-205ENST00000566136 NDUFAF4Q9P032 175 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 BAG5Q9UL15 447 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 RUVBL1Q9Y265 456 aaKnown RBP10.68□□□□□ -0.7
UBFD1-205ENST00000566136 STRAPQ9Y3F4 350 aaKnown RBP10.68□□□□□ -0.7
UBFD1-205ENST00000566136 ADAMDEC1O15204 470 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 NPHS1O60500 1241 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 SBK3P0C264 359 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 TNFRSF1AP19438 455 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 JAK1P23458 1154 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 GATA4P43694 442 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 GHRHRQ02643 423 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 KCNC3Q14003 757 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 AAK1Q2M2I8 961 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 PLEKHS1Q5SXH7 462 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 CORO6Q6QEF8 472 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 IFT20Q8IY31 132 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 TMEM116Q8NCL8 245 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 AZIN2Q96A70 460 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 SAMD8Q96LT4 415 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 SYT11Q9BT88 431 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 TP63Q9H3D4 680 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-205ENST00000566136 MTG2Q9H4K7 406 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 ARHGEF3Q9NR81 526 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 MBD1Q9UIS9 605 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-205ENST00000566136 ADAMTS6Q9UKP5 1117 aa10.68□□□□□ -0.7
UBFD1-205ENST00000566136 ANKRD63C9JTQ0 380 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 LINC01387J3KSC0 135 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 PLK4O00444 970 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 ADCY6O43306 1168 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 GLRA2P23416 452 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 ANXA13P27216 316 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 PSMC5P62195 406 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 TNFRSF17Q02223 184 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 SHEQ5VZ18 495 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 SNRNP48Q6IEG0 339 aaKnown RBP10.67□□□□□ -0.7
UBFD1-205ENST00000566136 SULT1C3Q6IMI6 304 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 KIAA1324Q6UXG2 1013 aaKnown RBP10.67□□□□□ -0.7
UBFD1-205ENST00000566136 NT5DC3Q86UY8 548 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 CBWD2Q8IUF1 395 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 CILP2Q8IUL8 1156 aa10.67□□□□□ -0.7
UBFD1-205ENST00000566136 XXYLT1Q8NBI6 393 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms