RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 BIRC5O15392 142 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 SNX3O60493 162 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 EDF1O60869 148 aaKnown RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 COL6A2P12110 1019 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 HLA-EP13747 358 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 BPIP17213 487 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 IGFBP4P22692 258 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 ALDH3A1P30838 453 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 CA5AP35218 305 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 PTSQ03393 145 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 EIF4HQ15056 248 aaKnown RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 CCDC153Q494R4 210 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 GKAP1Q5VSY0 366 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 LRRC66Q68CR7 880 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 TMEM151AQ8N4L1 468 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 NXNL1Q96CM4 212 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 NMRAL1Q9HBL8 299 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 IL26Q9NPH9 171 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 B4GALT6Q9UBX8 382 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 HCN2Q9UL51 889 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 A0A1W2PQ67 120 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 NDUFS3O75489 264 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 TIMP2P16035 220 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 POU3F3P20264 500 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 KCNA4P22459 653 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 ZNF234Q14588 700 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 PCLAFQ15004 111 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 CHI3L2Q15782 390 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 FNDC3BQ53EP0 1204 aaKnown RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 FAM45BPQ6NSW5 357 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 BRAT1Q6PJG6 821 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 TMEM207Q6UWW9 146 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 FAM151BQ6UXP7 276 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 OTOAQ7RTW8 1153 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 YTHDF3Q7Z739 585 aaKnown RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 FAM45AQ8TCE6 357 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 SCG3Q8WXD2 468 aaKnown RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 C19orf43Q9BQ61 176 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 AARSD1Q9BTE6 412 aaKnown RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 UNKQ9C0B0 810 aaKnown RBP17.99■□□□□ 0.47
COMMD4-208ENST00000563220 COPG2Q9UBF2 871 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 NUMBLQ9Y6R0 609 aa17.99■□□□□ 0.47
COMMD4-208ENST00000563220 KIF26AQ9ULI4 1882 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-208ENST00000563220 A0A087X1B8 175 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 UBA6A0AVT1 1052 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-208ENST00000563220 KLF11O14901 512 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 OR1I1O60431 355 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 SRP72O76094 671 aaKnown RBP17.98■□□□□ 0.47
COMMD4-208ENST00000563220 KLHL2O95198 593 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 WISP3O95389 354 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-208ENST00000563220 SBK3P0C264 359 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 CHRM1P11229 460 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-208ENST00000563220 FDXRP22570 491 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 FMO4P31512 558 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 POLR2LP62875 67 aaKnown RBP17.98■□□□□ 0.47
COMMD4-208ENST00000563220 CACNG1Q06432 222 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 POM121L1PQ3SYA9 428 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 C9orf64Q5T6V5 341 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 TAS2R42Q7RTR8 314 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 PIM3Q86V86 326 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 C10orf107Q8IVU9 208 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 MICALL1Q8N3F8 863 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 KDM1BQ8NB78 822 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 TSPAN17Q96FV3 270 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 TMEM245Q9H330 911 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 IGSF5Q9NSI5 407 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 CORO1CQ9ULV4 474 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-208ENST00000563220 SLC30A1Q9Y6M5 507 aa17.98■□□□□ 0.47
COMMD4-208ENST00000563220 TSPAN11A1L157 253 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 G3V2L1 256 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 KAT7O95251 611 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 GLRBP48167 497 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 HNRNPA1L2Q32P51 320 aaKnown RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 ITPRIPL2Q3MIP1 535 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 ZNF805Q5CZA5 627 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 RFLNAQ6ZTI6 216 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 LCA5Q86VQ0 697 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 STK40Q8N2I9 435 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 CBARPQ8N350 705 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 GPR26Q8NDV2 337 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 HEXDCQ8WVB3 486 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 ANKRD49Q8WVL7 239 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 SUSD6Q92537 303 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 LRIG1Q96JA1 1093 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 BIRC8Q96P09 236 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 GPAMQ9HCL2 828 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 FBRSL1Q9HCM7 1045 aaKnown RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 ZDHHC4Q9NPG8 344 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 CPSF2Q9P2I0 782 aaKnown RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 EPS15L1Q9UBC2 864 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 SARDHQ9UL12 918 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 MED16Q9Y2X0 877 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 USP15Q9Y4E8 981 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 COL4A3Q01955 1670 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 UNC80Q8N2C7 3258 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 GOLGA8CPA6NN73 597 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 PRAMEF1O95521 474 aa17.97■□□□□ 0.47
COMMD4-208ENST00000563220 FGF3P11487 239 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-208ENST00000563220 CPA3P15088 417 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms