RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 NFKBIAP25963 317 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SERPINB6P35237 376 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ARSDP51689 593 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PIGHQ14442 188 aaPredicted RBP16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 IHHQ14623 411 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MANEAQ5SRI9 462 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 LRRC66Q68CR7 880 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 DOK6Q6PKX4 331 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 USP45Q70EL2 814 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NSMCE1Q8WV22 266 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PMEPA1Q969W9 287 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SCARF2Q96GP6 870 aaPredicted RBP16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CCDC74BQ96LY2 380 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ABCG8Q9H221 673 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NT5MQ9NPB1 228 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TMEM98Q9Y2Y6 226 aa16.64■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SMTNL1A8MU46 457 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 HGSO14964 777 aaPredicted RBP16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SLC28A2O43868 658 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MFSD11O43934 449 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 FGF3P11487 239 aaPredicted RBP16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CD82P27701 267 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CSF2RBP32927 897 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 GPR3P46089 330 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 GPR1P46091 355 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PTSQ03393 145 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NFATC3Q12968 1075 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MMRN1Q13201 1228 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NR1I3Q14994 352 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CLPPQ16740 277 aaPredicted RBP16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 FIGNQ5HY92 759 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NKAIN2Q5VXU1 208 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TRIM74Q86UV6 250 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 AP2M1Q96CW1 435 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 AGAP2Q99490 1192 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SEMA3CQ99985 751 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 B3GNT4Q9C0J1 378 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CDH19Q9H159 772 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ANAPC7Q9UJX3 599 aa16.63■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 A0A0J9YYE9 177 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TRBC1P01850 177 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ACTR1BP42025 376 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 LIMK2P53671 638 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ACTR1AP61163 376 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CYP4F2P78329 520 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TDRD12Q587J7 1177 aaKnown RBP16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ADAMTSL4Q6UY14 1074 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 FAM71BQ8TC56 605 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 HTR3CQ8WXA8 447 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 JPH3Q8WXH2 748 aaPredicted RBP16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SCAMP4Q969E2 229 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 OR2M4Q96R27 311 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NUP85Q9BW27 656 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 AKAP7Q9P0M2 348 aaPredicted RBP16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TMEM9Q9P0T7 183 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PCDHB11Q9Y5F2 797 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 COL12A1Q99715 3063 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MYO18BQ8IUG5 2567 aa16.62■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SDK2Q58EX2 2172 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 IGHV1OR21-1A0A087WYE8 117 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ZW10O43264 779 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MAP3K6O95382 1288 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 FAM87AP0C7U9 286 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 THRAP10827 490 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ITGB6P18564 788 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MPSTP25325 297 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 GARSP41250 739 aaKnown RBP16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ZNF165P49910 485 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ARSEP51690 589 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 DSC2Q02487 901 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 GALNT2Q10471 571 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 BIRC2Q13490 618 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 KRT81Q14533 505 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 IQCB1Q15051 598 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PYCR3Q53H96 274 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 TMEM164Q5U3C3 297 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 NCBP2-AS2Q69YL0 99 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ALG1LQ6GMV1 187 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MARK2Q7KZI7 788 aaKnown RBP16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PRICKLE2Q7Z3G6 844 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 OR4D9Q8NGE8 314 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 MAML1Q92585 1016 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 COX14Q96I36 57 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ARHGAP9Q9BRR9 750 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 POLR1EQ9GZS1 481 aaKnown RBP16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 STARD5Q9NSY2 213 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 RCOR3Q9P2K3 495 aaPredicted RBP16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 IP6K2Q9UHH9 426 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 PCYT1BQ9Y5K3 369 aaPredicted RBP16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 UBR5O95071 2799 aaPredicted RBP16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 AHCTF1Q8WYP5 2266 aa16.61■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 STMND1H3BQB6 276 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 EML2O95834 649 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SERPINC1P01008 464 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 CYP1A2P05177 515 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ZNF30P17039 623 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 STC1P52823 247 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 ITKQ08881 620 aa16.6■□□□□ 0.25
VPS9D1-AS1-201ENST00000562298 SQSTM1Q13501 440 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms