RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CASC3O15234 703 aaKnown RBP13.85□□□□□ -0.19
TPM1-230ENST00000561266 YKT6O15498 198 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 BUD23O43709 281 aaKnown RBP13.85□□□□□ -0.19
TPM1-230ENST00000561266 NRDCO43847 1150 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 CEP104O60308 925 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 USP12O75317 370 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 DKK1O94907 266 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 SLC4A1P02730 911 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 CEACAM5P06731 702 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 FTH1P19P0C7X4 201 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 GOLGA6DP0CG33 693 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 CLDN6P56747 220 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 SRP54P61011 504 aaKnown RBP13.85□□□□□ -0.19
TPM1-230ENST00000561266 CDK3Q00526 305 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 MPP3Q13368 585 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 PROX2Q3B8N5 592 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 KCTD11Q693B1 232 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 RAET1GQ6H3X3 334 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 RANBP10Q6VN20 620 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 MARCH9Q86YJ5 346 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 HID1Q8IV36 788 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 SFTPA2Q8IWL1 248 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 NDUFAF2Q8N183 169 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 CCL4L1Q8NHW4 92 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 LMX1AQ8TE12 382 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 AP2M1Q96CW1 435 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 WDR92Q96MX6 357 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 FRMD8Q9BZ67 464 aaPredicted RBP13.85□□□□□ -0.19
TPM1-230ENST00000561266 ZFYVE1Q9HBF4 777 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 BPIFA1Q9NP55 256 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 GOLGA6AQ9NYA3 693 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 TMPRSS11EQ9UL52 423 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 TMEM98Q9Y2Y6 226 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 PLEKHM1Q9Y4G2 1056 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 KCTD3Q9Y597 815 aa13.85□□□□□ -0.19
TPM1-230ENST00000561266 OAS3Q9Y6K5 1087 aaKnown RBP13.85□□□□□ -0.19
TPM1-230ENST00000561266 ZNF106Q9H2Y7 1883 aaKnown RBP13.84□□□□□ -0.19
TPM1-230ENST00000561266 FANCGO15287 622 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 INPP4BO15327 924 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 AQP9O43315 295 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 LDOC1O95751 146 aaPredicted RBP13.84□□□□□ -0.19
TPM1-230ENST00000561266 EPOP01588 193 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 FGGP02679 453 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 HOXC4P09017 264 aaPredicted RBP13.84□□□□□ -0.19
TPM1-230ENST00000561266 ZSCAN5DPP0CG00 497 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 TSHRP16473 764 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 PMLP29590 882 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 KCNJ1P48048 391 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 HK3P52790 923 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 GEMP55040 296 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 HNRNPKP61978 463 aaKnown RBP eCLIP13.84□□□□□ -0.19
TPM1-230ENST00000561266 PPARDQ03181 441 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 PTK2BQ14289 1009 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 DEFB133Q30KQ1 61 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 PRRT3Q5FWE3 981 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 ZNF648Q5T619 568 aaPredicted RBP13.84□□□□□ -0.19
TPM1-230ENST00000561266 HENMT1Q5T8I9 393 aaKnown RBP13.84□□□□□ -0.19
TPM1-230ENST00000561266 ALS2CLQ60I27 953 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 NRSN1Q8IZ57 195 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 OR56A4Q8NGH8 313 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 OR4C6Q8NH72 309 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 COG1Q8WTW3 980 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 RTP4Q96DX8 246 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 CNDP2Q96KP4 475 aaKnown RBP13.84□□□□□ -0.19
TPM1-230ENST00000561266 WDR26Q9H7D7 661 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 ARFGAP3Q9NP61 516 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
TPM1-230ENST00000561266 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
TPM1-230ENST00000561266 COL27A1Q8IZC6 1860 aaPredicted RBP13.84□□□□□ -0.19
TPM1-230ENST00000561266 GAPDHSO14556 408 aaPredicted RBP13.83□□□□□ -0.2
TPM1-230ENST00000561266 GPR39O43194 453 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 TNFSF14O43557 240 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 MYCLP1P12525 358 aaPredicted RBP13.83□□□□□ -0.2
TPM1-230ENST00000561266 BPIP17213 487 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 NFKBIAP25963 317 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 TEAD1P28347 426 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 GPR1P46091 355 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 FOXC1Q12948 553 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 ITPRIPL1Q6GPH6 555 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 DOK6Q6PKX4 331 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 ADAMTSL4Q6UY14 1074 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 ZNF765Q7L2R6 523 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 NLRP8Q86W28 1048 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 C17orf53Q8N3J3 647 aaPredicted RBP13.83□□□□□ -0.2
TPM1-230ENST00000561266 RASGEF1CQ8N431 466 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 CHCHD4Q8N4Q1 142 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 PRELID2Q8N945 189 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 COX14Q96I36 57 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 CDC6Q99741 560 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 GPR63Q9BZJ6 419 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 TMEM168Q9H0V1 697 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 FAM83DQ9H4H8 585 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 SUDS3Q9H7L9 328 aaPredicted RBP13.83□□□□□ -0.2
TPM1-230ENST00000561266 CYP4F12Q9HCS2 524 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 PIH1D1Q9NWS0 290 aaKnown RBP13.83□□□□□ -0.2
TPM1-230ENST00000561266 FTSJ1Q9UET6 329 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 JRKLQ9Y4A0 524 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 DGKBQ9Y6T7 804 aa13.83□□□□□ -0.2
TPM1-230ENST00000561266 AKAP13Q12802 2813 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms