RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 IVLP07476 585 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 F7P08709 466 aaPredicted RBP10.4□□□□□ -0.74
TPM1-221ENST00000559831 NUDT17P0C025 328 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 PRSS56P0CW18 603 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 AOC1P19801 751 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 ARCN1P48444 511 aaKnown RBP10.4□□□□□ -0.74
TPM1-221ENST00000559831 PEX6Q13608 980 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 STAT4Q14765 748 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 CHRNA6Q15825 494 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 FASTKD1Q53R41 847 aaKnown RBP10.4□□□□□ -0.74
TPM1-221ENST00000559831 SEL1L3Q68CR1 1132 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 ZNF470Q6ECI4 717 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 NEPROQ6NW34 567 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 Q6ZVL8 140 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 GPR26Q8NDV2 337 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 OR4L1Q8NH43 312 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 KLK6Q92876 244 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 NUS1Q96E22 293 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 DTD2Q96FN9 168 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 COQ10AQ96MF6 247 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 ZIM3Q96PE6 472 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 AGAP2Q99490 1192 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 FAM167BQ9BTA0 163 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 SPATA16Q9BXB7 569 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 FUT8Q9BYC5 575 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 BTBD1Q9H0C5 482 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 ACSS3Q9H6R3 686 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 ITM2CQ9NQX7 267 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 RAD18Q9NS91 495 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 CATSPERZQ9NTU4 200 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 DLGAP2Q9P1A6 1054 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 ZFATQ9P243 1243 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 USP36Q9P275 1121 aaKnown RBP10.4□□□□□ -0.74
TPM1-221ENST00000559831 SLC30A1Q9Y6M5 507 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 PLXND1Q9Y4D7 1925 aa10.4□□□□□ -0.74
TPM1-221ENST00000559831 CACNA1IQ9P0X4 2223 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 TLDC2A0PJX2 215 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 LRRC72A6NJI9 287 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 WNT9AO14904 365 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 CD3EAPO15446 510 aaKnown RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 GPR39O43194 453 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 UGT1A9O60656 530 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 SRP72O76094 671 aaKnown RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 RECQL5O94762 991 aaPredicted RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 PRAMEF1O95521 474 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 SEMA4FO95754 770 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 C7P10643 843 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 GM2AP17900 193 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 ITGALP20701 1170 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 PSMA3P25788 255 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 OXTRP30559 389 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 MAT2AP31153 395 aaKnown RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 FOXN2P32314 431 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 ACSL1P33121 698 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 SLC1A2P43004 574 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 SLCO1A2P46721 670 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 PPP2CBP62714 309 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 RPS21P63220 83 aaKnown RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 PPP2CAP67775 309 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 XIAPP98170 497 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 CACNG1Q06432 222 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 ZNF284Q2VY69 593 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 CEP85LQ5SZL2 805 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 TEDDM1Q5T9Z0 273 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 ZDHHC20Q5W0Z9 365 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 KIAA1161Q6NSJ0 714 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 LRIG3Q6UXM1 1119 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 MARK2Q7KZI7 788 aaKnown RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 TAS2R42Q7RTR8 314 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 TECPR1Q7Z6L1 1165 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 LDB1Q86U70 411 aaPredicted RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 DENND6AQ8IWF6 608 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 NRSN1Q8IZ57 195 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 CBARPQ8N350 705 aaPredicted RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 CAMKK1Q8N5S9 505 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 GABPB2Q8TAK5 448 aaPredicted RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 CALML6Q8TD86 181 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 EPS8L3Q8TE67 593 aaKnown RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 RLN3Q8WXF3 142 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 SCAMP4Q969E2 229 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.39□□□□□ -0.75
TPM1-221ENST00000559831 FAM131CQ96AQ9 280 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 AP2M1Q96CW1 435 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 TOE1Q96GM8 510 aaKnown RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 PAFAH2Q99487 392 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 RIOK2Q9BVS4 552 aaKnown RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 ABCG8Q9H221 673 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 FAM83DQ9H4H8 585 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 ASB8Q9H765 288 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 UGT1A7Q9HAW7 530 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 UGT1A10Q9HAW8 530 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 UGT1A8Q9HAW9 530 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 SGK2Q9HBY8 427 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 PREBQ9HCU5 417 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 IL26Q9NPH9 171 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 ZNF446Q9NWS9 450 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 VPS18Q9P253 973 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 MARCH4Q9P2E8 410 aaPredicted RBP10.39□□□□□ -0.75
TPM1-221ENST00000559831 TXNDC16Q9P2K2 825 aa10.39□□□□□ -0.75
TPM1-221ENST00000559831 CRLS1Q9UJA2 301 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms