RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 TRIB3Q96RU7 358 aa11.22□□□□□ -0.61
BMP4-204ENST00000558961 MAK16Q9BXY0 300 aaKnown RBP11.22□□□□□ -0.61
BMP4-204ENST00000558961 FRMD8Q9BZ67 464 aaPredicted RBP11.22□□□□□ -0.61
BMP4-204ENST00000558961 NRSN2Q9GZP1 204 aa11.22□□□□□ -0.61
BMP4-204ENST00000558961 CCDC86Q9H6F5 360 aaKnown RBP11.22□□□□□ -0.61
BMP4-204ENST00000558961 CLCA2Q9UQC9 943 aa11.22□□□□□ -0.61
BMP4-204ENST00000558961 CHKBQ9Y259 395 aa11.22□□□□□ -0.61
BMP4-204ENST00000558961 SAR1BQ9Y6B6 198 aa11.22□□□□□ -0.61
BMP4-204ENST00000558961 ASXL3Q9C0F0 2248 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 ZNF106Q9H2Y7 1883 aaKnown RBP11.21□□□□□ -0.61
BMP4-204ENST00000558961 CST8O60676 142 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 ZRANB2O95218 330 aaKnown RBP eCLIP11.21□□□□□ -0.61
BMP4-204ENST00000558961 FTCDO95954 541 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 TNFP01375 233 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 JUPP14923 745 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 PECAM1P16284 738 aaPredicted RBP11.21□□□□□ -0.61
BMP4-204ENST00000558961 CTPS1P17812 591 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 TCP1P17987 556 aaKnown RBP11.21□□□□□ -0.61
BMP4-204ENST00000558961 PTPN7P35236 360 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 CD86P42081 329 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 RPIAP49247 311 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 EPHB1P54762 984 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 DYNLT1P63172 113 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 CDK3Q00526 305 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 PTSQ03393 145 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 ADCY2Q08462 1091 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 AP1B1Q10567 949 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 TARDBPQ13148 414 aaKnown RBP eCLIP11.21□□□□□ -0.61
BMP4-204ENST00000558961 NR0B2Q15466 257 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 CDKN3Q16667 212 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 ODF2Q5BJF6 829 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 DAAM2Q86T65 1068 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 RCOR2Q8IZ40 523 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 NRSN1Q8IZ57 195 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 ARL10Q8N8L6 244 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 MDM1Q8TC05 714 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 KRT35Q92764 455 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 GLMNQ92990 594 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 NAT6Q93015 286 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 SCARF2Q96GP6 870 aaPredicted RBP11.21□□□□□ -0.61
BMP4-204ENST00000558961 SMIM14Q96QK8 99 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 OSBPL9Q96SU4 736 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 SLC25A51Q9H1U9 297 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 PHPT1Q9NRX4 125 aaPredicted RBP11.21□□□□□ -0.61
BMP4-204ENST00000558961 SLC17A4Q9Y2C5 497 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.21□□□□□ -0.61
BMP4-204ENST00000558961 TTLL3Q9Y4R7 772 aa11.21□□□□□ -0.61
BMP4-204ENST00000558961 RP1P56715 2156 aa11.21□□□□□ -0.62
BMP4-204ENST00000558961 ARHGEF17Q96PE2 2063 aaPredicted RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 A0A0U1RQS6 177 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 ANKRD66B4E2M5 251 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 MTSS1O43312 755 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 KRT37O76014 449 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 SLU7O95391 586 aaKnown RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 PYGLP06737 847 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 MYF5P13349 255 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 CTSEP14091 401 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 PTPN3P26045 913 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 CTNNA2P26232 953 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 NAP1L1P55209 391 aaKnown RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 COPS2P61201 443 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 WASHC5Q12768 1159 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 QPCTQ16769 361 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 TEX44Q53QW1 395 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 HENMT1Q5T8I9 393 aaKnown RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 RAET1GQ6H3X3 334 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 ADAMTSL4Q6UY14 1074 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 BBS12Q6ZW61 710 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 GKN2Q86XP6 184 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 RASGEF1CQ8N431 466 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.2□□□□□ -0.62
BMP4-204ENST00000558961 KYQ8NBH2 561 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 LRRN4CLQ8ND94 238 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 LPCAT1Q8NF37 534 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 GPR156Q8NFN8 814 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 COG1Q8WTW3 980 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 TFB1MQ8WVM0 346 aaKnown RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 P3H4Q92791 437 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 TEKT5Q96M29 485 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 ADGRE3Q9BY15 652 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 CEP41Q9BYV8 373 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 ABCG8Q9H221 673 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 MRPL40Q9NQ50 206 aaKnown RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 NFKBIL1Q9UBC1 381 aaPredicted RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 SAE1Q9UBE0 346 aaPredicted RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 RNF14Q9UBS8 474 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 TTC7AQ9ULT0 858 aaPredicted RBP11.2□□□□□ -0.62
BMP4-204ENST00000558961 EFR3BQ9Y2G0 817 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 PCDHA3Q9Y5H8 950 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 KNTC1P50748 2209 aa11.2□□□□□ -0.62
BMP4-204ENST00000558961 CCDC66A2RUB6 948 aa11.19□□□□□ -0.62
BMP4-204ENST00000558961 RGSL1A5PLK6 1076 aa11.19□□□□□ -0.62
BMP4-204ENST00000558961 MIF4GDA9UHW6 222 aaKnown RBP11.19□□□□□ -0.62
BMP4-204ENST00000558961 APOC4-APOC2K7ER74 178 aa11.19□□□□□ -0.62
BMP4-204ENST00000558961 TCEA3O75764 348 aa11.19□□□□□ -0.62
BMP4-204ENST00000558961 MT-CO3P00414 261 aa11.19□□□□□ -0.62
BMP4-204ENST00000558961 APOC2P02655 101 aa11.19□□□□□ -0.62
BMP4-204ENST00000558961 FUCA1P04066 466 aa11.19□□□□□ -0.62
BMP4-204ENST00000558961 CEACAM5P06731 702 aa11.19□□□□□ -0.62
BMP4-204ENST00000558961 IVLP07476 585 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms