RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 RAD9BQ6WBX8 426 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 ZC3H18Q86VM9 953 aaKnown RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 ARL10Q8N8L6 244 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 SPC24Q8NBT2 197 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 ACRBPQ8NEB7 543 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 PATE1Q8WXA2 126 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 MLPHQ9BV36 600 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 TEX101Q9BY14 249 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 FOXP3Q9BZS1 431 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 NRSN2Q9GZP1 204 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 USP29Q9HBJ7 922 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 ATXN7L1Q9ULK2 861 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 PPIL1Q9Y3C6 166 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 EPN1Q9Y6I3 576 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 DGKBQ9Y6T7 804 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 CAPN8A6NHC0 703 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 PDE2AO00408 941 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-208ENST00000558827 NOBOXO60393 691 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 SOD1P00441 154 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 ATP1A1P05023 1023 aaKnown RBP12.47□□□□□ -0.41
SMAD3-208ENST00000558827 RPLP0P05388 317 aaKnown RBP12.47□□□□□ -0.41
SMAD3-208ENST00000558827 RTP5Q14D33 572 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 NOMO1Q15155 1222 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 ALG1LQ6GMV1 187 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 RBM44Q6ZP01 1051 aaKnown RBP12.47□□□□□ -0.41
SMAD3-208ENST00000558827 LYSMD3Q7Z3D4 306 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 B3GNT8Q7Z7M8 397 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 DAAM2Q86T65 1068 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 NT5DC3Q86UY8 548 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 NRROSQ86YC3 692 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 TBATAQ96M53 351 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 OLFM3Q96PB7 478 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 FAM118BQ9BPY3 351 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 FRMD8Q9BZ67 464 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-208ENST00000558827 GLOD4Q9HC38 313 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 NCKIPSDQ9NZQ3 722 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 SATB2Q9UPW6 733 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 REXO2Q9Y3B8 237 aaKnown RBP12.47□□□□□ -0.41
SMAD3-208ENST00000558827 PCYT1BQ9Y5K3 369 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-208ENST00000558827 ENTPD2Q9Y5L3 495 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 ST14Q9Y5Y6 855 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 RNF215Q9Y6U7 377 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 ITPR1Q14643 2758 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 NBEAQ8NFP9 2946 aa12.47□□□□□ -0.41
SMAD3-208ENST00000558827 A0A0U1RQJ8 604 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 A0A1W2PQM1 296 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 ANKRD66B4E2M5 251 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 PSMD11O00231 422 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 TNFRSF10CO14798 259 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 PPP1R12AO14974 1030 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-208ENST00000558827 NDUFA10O95299 355 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 LCA5LO95447 670 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 HOXC4P09017 264 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-208ENST00000558827 HOXB3P14651 431 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-208ENST00000558827 ZFXP17010 805 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-208ENST00000558827 CA4P22748 312 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 CES1P23141 567 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 PTPN3P26045 913 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 ADCY8P40145 1251 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 CTBSQ01459 385 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 SPIDRQ14159 915 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 TCEAL1Q15170 157 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 AMZ1Q400G9 498 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 AADACL2Q6P093 401 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 LVRNQ6Q4G3 990 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 CCDC170Q8IYT3 715 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 SLC25A41Q8N5S1 370 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 GPR156Q8NFN8 814 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 ZDHHC1Q8WTX9 485 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 NAT6Q93015 286 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 FATE1Q969F0 183 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 IMP4Q96G21 291 aaKnown RBP12.46□□□□□ -0.41
SMAD3-208ENST00000558827 MRFAP1L1Q96HT8 127 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 WDR24Q96S15 920 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 HERPUD2Q9BSE4 406 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 ANP32EQ9BTT0 268 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 LACRTQ9GZZ8 138 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 EPB41L5Q9HCM4 733 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 HAUS2Q9NVX0 235 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 TAAR2Q9P1P5 351 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 DKK4Q9UBT3 224 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 AMACRQ9UHK6 382 aa12.46□□□□□ -0.41
SMAD3-208ENST00000558827 OAS3Q9Y6K5 1087 aaKnown RBP12.46□□□□□ -0.41
SMAD3-208ENST00000558827 hCG_1818297A0A087WSY0 165 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 FADS2P1A8MWK0 482 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 ZNF487B1APH4 448 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 PSTPIP1O43586 416 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 ZRANB2O95218 330 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMAD3-208ENST00000558827 FGF1P05230 155 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 HGFP14210 728 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 NFKB1P19838 968 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 ACTR1BP42025 376 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 SPINT3P49223 89 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 OR1D5P58170 312 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 ACTR1AP61163 376 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 WASHC5Q12768 1159 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 TFDP2Q14188 446 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 C14orf28Q4W4Y0 310 aa12.45□□□□□ -0.42
SMAD3-208ENST00000558827 TEX44Q53QW1 395 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms