RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 HTR3CQ8WXA8 447 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CPT1BQ92523 772 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 NDRG1Q92597 394 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 PRCCQ92733 491 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 GFM2Q969S9 779 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 LRRC39Q96DD0 335 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 C1orf74Q96LT6 269 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CASD1Q96PB1 797 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 BBC3Q96PG8 261 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 HAPLN3Q96S86 360 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 FOXB1Q99853 325 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 RAB6CQ9H0N0 254 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CDC42EP4Q9H3Q1 356 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 HIPK3Q9H422 1215 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 VPS37BQ9H9H4 285 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 PIGVQ9NUD9 493 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 TMLHEQ9NVH6 421 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 GPATCH2LQ9NWQ4 482 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 DDIT4Q9NX09 232 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 DONSONQ9NYP3 566 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 NINJ2Q9NZG7 142 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CACNG4Q9UBN1 327 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 OR12D3Q9UGF7 316 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 LGALS13Q9UHV8 139 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 SLC12A6Q9UHW9 1150 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 SLC24A2Q9UI40 661 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ADAM28Q9UKQ2 775 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 PACSIN3Q9UKS6 424 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 TRHDEQ9UKU6 1024 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ZMYND8Q9ULU4 1186 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 SCML2Q9UQR0 700 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 TTC28Q96AY4 2481 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 COL11A1P12107 1806 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 LOXHD1Q8IVV2 1947 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 EYSQ5T1H1 3165 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 TRIOBPQ9H2D6 2365 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 LAMA2P24043 3122 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 SYNJ2BP-COX16A0A087WUM0 186 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 ABHD14A-ACY1A0A1B0GW23 586 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 EXOC1LA0A1B0GW35 172 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 MAGEB16A2A368 324 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SDR42E2A6NKP2 422 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 E7ESA3 106 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 DVL2O14641 736 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 PSMD3O43242 534 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 CREB3O43889 395 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 PQBP1O60828 265 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 OPHN1O60890 802 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 RTN3O95197 1032 aaPredicted RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 ITGB1P05556 798 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 GALTP07902 379 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 MLNP12872 115 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 GOT1P17174 413 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 FBLP22087 321 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 YWHAQP27348 245 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 LSP1P33241 339 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SERPINB6P35237 376 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 FDFT1P37268 417 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 MSH2P43246 934 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SLCO1A2P46721 670 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 TUFMP49411 452 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 GLUD2P49448 558 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SLC18A1P54219 525 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 ATXN1P54253 815 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 CACNA2D1P54289 1103 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 GEMIN4P57678 1058 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 TPI1P60174 286 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 IFI35P80217 286 aaPredicted RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 BASP1P80723 227 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 GBE1Q04446 702 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 TLE2Q04725 743 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SLC10A2Q12908 348 aaPredicted RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 DPYSQ14117 519 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 GPNMBQ14956 572 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 ZSCAN26Q16670 478 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 LONRF1Q17RB8 773 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 KCTD19Q17RG1 926 aaPredicted RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 KLHL38Q2WGJ6 581 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 TNFAIP8L3Q5GJ75 292 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 HECTD2Q5U5R9 776 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 ZNF280DQ6N043 979 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 B4GALNT4Q76KP1 1039 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 GPRIN1Q7Z2K8 1008 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 CLEC14AQ86T13 490 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 PRUNE1Q86TP1 453 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 GLCCI1Q86VQ1 547 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 CEP57Q86XR8 500 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SPATS2Q86XZ4 545 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 SCN4BQ8IWT1 228 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 PYROXD2Q8N2H3 581 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SH2D3CQ8N5H7 860 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 CCNYQ8ND76 341 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SCAMP5Q8TAC9 235 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SPPL2BQ8TCT7 592 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 HASPINQ8TF76 798 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 ARHGEF2Q92974 986 aaKnown RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 ZNF669Q96BR6 464 aaPredicted RBP4.54□□□□□ -1.68
SRP54-212ENST00000556992 SPATA17Q96L03 361 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 C9orf72Q96LT7 481 aa4.54□□□□□ -1.68
SRP54-212ENST00000556992 SPATA13Q96N96 652 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms