RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 CACUL1Q86Y37 369 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 CNTN4Q8IWV2 1026 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 TBC1D3Q8IZP1 549 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-212ENST00000556541 TP53I13Q8NBR0 393 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-212ENST00000556541 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
FOXN3-212ENST00000556541 FBXO36Q8NEA4 188 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 OR4K2Q8NGD2 314 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 GSDMBQ8TAX9 411 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 CALML6Q8TD86 181 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 DNASE2BQ8WZ79 361 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 CENPTQ96BT3 561 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 ULK4Q96C45 1275 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 NUS1Q96E22 293 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 VPS35Q96QK1 796 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 KLF6Q99612 283 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-212ENST00000556541 SLC17A9Q9BYT1 436 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 TPSD1Q9BZJ3 242 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 FAM83DQ9H4H8 585 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 PLAC1Q9HBJ0 212 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 CD93Q9NPY3 652 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 CHRAC1Q9NRG0 131 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 MOCS1Q9NZB8 636 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 MBD1Q9UIS9 605 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-212ENST00000556541 GGT7Q9UJ14 662 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 ITM2BQ9Y287 266 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.23□□□□□ -0.61
FOXN3-212ENST00000556541 MAD1L1Q9Y6D9 718 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 RPS6KL1Q9Y6S9 549 aa11.23□□□□□ -0.61
FOXN3-212ENST00000556541 A0A1W2PPC4 97 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 IGLON5A6NGN9 336 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 PRAMEF26H0Y7S4 382 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 GAPDHSO14556 408 aaPredicted RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 MMP20O60882 483 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 NDUFS2O75306 463 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 ERLIN1O75477 346 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 OGNP20774 298 aaKnown RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 HNRNPA2B1P22626 353 aaKnown RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 ARNTP27540 789 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 NMBRP28336 390 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 HOXD12P35452 270 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 TRIM23P36406 574 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 FNTBP49356 437 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 OVGP1Q12889 678 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 SGCGQ13326 291 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 NAB1Q13506 487 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 SEPT6Q14141 434 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 FGL2Q14314 439 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 FASTKD3Q14CZ7 662 aaKnown RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 ACOX1Q15067 660 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 LRRC73Q5JTD7 316 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 LYPLAL1Q5VWZ2 237 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 PMS2CLQ68D20 193 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 CASC4Q6P4E1 433 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 ADAMTSL4Q6UY14 1074 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 CERS6Q6ZMG9 384 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 UNC5AQ6ZN44 842 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 KIAA0408Q6ZU52 694 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 Q6ZVL8 140 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 SNX20Q7Z614 316 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 IQCHQ86VS3 1027 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 IGDCC3Q8IVU1 814 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 TMEM145Q8NBT3 493 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 GPR26Q8NDV2 337 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 OR13C4Q8NGS5 318 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 HEXDCQ8WVB3 486 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 MFSD3Q96ES6 412 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 DNAJC1Q96KC8 554 aaKnown RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 PWWP2AQ96N64 755 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 SMIM14Q96QK8 99 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 TCF12Q99081 682 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 ORAI3Q9BRQ5 295 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 WRAP53Q9BUR4 548 aaKnown RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 IRF2BPLQ9H1B7 796 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 ABCG8Q9H221 673 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 CDC42EP4Q9H3Q1 356 aaKnown RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 PPCSQ9HAB8 311 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 IL26Q9NPH9 171 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 PIH1D1Q9NWS0 290 aaKnown RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 FETUBQ9UGM5 382 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 CHMP2BQ9UQN3 213 aa11.22□□□□□ -0.61
FOXN3-212ENST00000556541 V9GYY5 206 aaPredicted RBP11.22□□□□□ -0.61
FOXN3-212ENST00000556541 GLYATL1P3A0A0U1RQE8 302 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 GPR89AB7ZAQ6 455 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 SRP72O76094 671 aaKnown RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 GPR89BP0CG08 455 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 ITGALP20701 1170 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 CD27P26842 260 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 AKT2P31751 481 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 FOXN2P32314 431 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 STX2P32856 288 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PHBP35232 272 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PPARGP37231 505 aaPredicted RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 ETV3P41162 512 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 PMS2P54278 862 aa11.21□□□□□ -0.61
FOXN3-212ENST00000556541 ADARP55265 1226 aaKnown RBP11.21□□□□□ -0.61
FOXN3-212ENST00000556541 YPEL5P62699 121 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms