RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 DLG2Q15700 870 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 CPSF6Q16630 551 aaKnown RBP eCLIP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 ANKRD22Q5VYY1 191 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 THAP5Q7Z6K1 395 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 HJURPQ8NCD3 748 aaPredicted RBP13.94□□□□□ -0.18
VTI1B-204ENST00000554659 COX4I2Q96KJ9 171 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 UNC93B1Q9H1C4 597 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 GBA3Q9H227 469 aa13.94□□□□□ -0.18
VTI1B-204ENST00000554659 PCP4L1A6NKN8 68 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 FARP2O94887 1054 aaPredicted RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 PIRTP0C851 137 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 PFKPQ01813 784 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 GBE1Q04446 702 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 OLFML2AQ68BL7 652 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 BTN2A1Q7KYR7 527 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 DET1Q7L5Y6 550 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 SPPL2CQ8IUH8 684 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 LPGAT1Q92604 370 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 FAM84AQ96KN4 292 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 C1QTNF7Q9BXJ2 289 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 ADM5C9JUS6 153 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 PLIN3O60664 434 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 RPP40O75818 363 aaKnown RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 ACLYP53396 1101 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 GLYATQ6IB77 296 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 TPGS1Q6ZTW0 290 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 DENND1CQ8IV53 801 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 ING3Q9NXR8 418 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 SMPD3Q9NY59 655 aaPredicted RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 OR10H3O60404 316 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 XYLBO75191 536 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 PAGE1O75459 146 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 SERPINB7O75635 380 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 TLX1P31314 330 aaPredicted RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 HTR7P34969 479 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 POLR2JP52435 117 aaKnown RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 RALGDSQ12967 914 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 KHDC1Q4VXA5 237 aaKnown RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 GALNT18Q6P9A2 607 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 AKAP14Q86UN6 197 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 CHPFQ8IZ52 775 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 MCFD2Q8NI22 146 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 TEFMQ96QE5 360 aaKnown RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 RBM4BQ9BQ04 359 aaKnown RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 RBM4Q9BWF3 364 aaKnown RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 WBP11Q9Y2W2 641 aaKnown RBP13.93□□□□□ -0.18
VTI1B-204ENST00000554659 DNAJA2O60884 412 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 CCNE2O96020 404 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 CSH1P0DML2 217 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 CSH2P0DML3 217 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 NR2F1P10589 423 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 PTPN9P43378 593 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 MTAPQ13126 283 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 C6orf52Q5T4I8 152 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 RD3Q7Z3Z2 195 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 TCAIMQ8N3R3 496 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 BANPQ8N9N5 519 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 B3GNT5Q9BYG0 378 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 OGDHLQ9ULD0 1010 aa13.93□□□□□ -0.18
VTI1B-204ENST00000554659 S100A6P06703 90 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 PRKAR1AP10644 381 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 CAPGP40121 348 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 BNC1Q01954 994 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 LSM12Q3MHD2 195 aaKnown RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 ARL13AQ5H913 290 aaPredicted RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 ERICH5Q6P6B1 374 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 MON1AQ86VX9 555 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 MCUBQ9NWR8 336 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 DKK3Q9UBP4 350 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 MFHAS1Q9Y4C4 1052 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 GPC6Q9Y625 555 aaPredicted RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 KCNE2Q9Y6J6 123 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 LRRC14BA6NHZ5 514 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 TBL1XO60907 577 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 DDNO94850 711 aaPredicted RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 GPIP06744 558 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 CHRNGP07510 517 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 NR2F6P10588 404 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 MAGP20916 626 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 COPZ1P61923 177 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 PPM1LQ5SGD2 360 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 ZNF655Q8N720 491 aaPredicted RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 FAR1Q8WVX9 515 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 NXNL1Q96CM4 212 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 CITED4Q96RK1 184 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 ZNF607Q96SK3 696 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 TMEM165Q9HC07 324 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 MRPL17Q9NRX2 175 aaKnown RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 ZNHIT2Q9UHR6 403 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 IRGMA1A4Y4 181 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 EME2A4GXA9 379 aaPredicted RBP13.92□□□□□ -0.18
VTI1B-204ENST00000554659 KCNU1A8MYU2 1149 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 SLC6A2P23975 617 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 MTHFRP42898 656 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 TWIST2Q8WVJ9 160 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 FNDC11Q9BVV2 318 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 TM6SF2Q9BZW4 377 aa13.92□□□□□ -0.18
VTI1B-204ENST00000554659 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms