RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 RHOT2Q8IXI1 618 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 GPBAR1Q8TDU6 330 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 SH3KBP1Q96B97 665 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 PRR11Q96HE9 360 aaPredicted RBP10.72□□□□□ -0.69
PNN-203ENST00000554117 OR2M4Q96R27 311 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 SLC38A3Q99624 504 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 PCDH9Q9HC56 1237 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 ETNK2Q9NVF9 386 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 TAAR2Q9P1P5 351 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 PNMA8BQ9ULN7 279 aaPredicted RBP10.72□□□□□ -0.69
PNN-203ENST00000554117 SUFUQ9UMX1 484 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 RPL26L1Q9UNX3 145 aaKnown RBP10.72□□□□□ -0.69
PNN-203ENST00000554117 RNF215Q9Y6U7 377 aa10.72□□□□□ -0.69
PNN-203ENST00000554117 C1orf232A0A0U1RR37 186 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 NPIPB15A6NHN6 443 aaPredicted RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 NVLO15381 856 aaKnown RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 DUX1O43812 170 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 MFSD11O43934 449 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 PROSCO94903 275 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 CSTF2P33240 577 aaKnown RBP eCLIP10.71□□□□□ -0.69
PNN-203ENST00000554117 ARHGAP25P42331 645 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 GPLD1P80108 840 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 AP1B1Q10567 949 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 MMRN1Q13201 1228 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 TRA2AQ13595 282 aaKnown RBP eCLIP10.71□□□□□ -0.698e-10■□□□□ 9.9
PNN-203ENST00000554117 HLTFQ14527 1009 aaKnown RBP eCLIP10.71□□□□□ -0.697e-18■■□□□ 12.4
PNN-203ENST00000554117 MESDQ14696 234 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 HSD11B1LQ7Z5J1 315 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 NLRP8Q86W28 1048 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 CCDC13Q8IYE1 715 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 TEX26Q8N6G2 289 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 LPCAT1Q8NF37 534 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 OR8K1Q8NGG5 319 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 OR10G6Q8NH81 332 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 FATE1Q969F0 183 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 VOPP1Q96AW1 172 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 HDAC11Q96DB2 347 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 CCDC42Q96M95 316 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 MCCC1Q96RQ3 725 aaPredicted RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 FERMT1Q9BQL6 677 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 MLPHQ9BV36 600 aaPredicted RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 LGR4Q9BXB1 951 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 FRMD8Q9BZ67 464 aaPredicted RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 CAAP1Q9H8G2 361 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 RMI1Q9H9A7 625 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 LUC7LQ9NQ29 371 aaKnown RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 KCNK4Q9NYG8 393 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 ZNHIT2Q9UHR6 403 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 CD84Q9UIB8 345 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 ATXN7L1Q9ULK2 861 aaPredicted RBP10.71□□□□□ -0.69
PNN-203ENST00000554117 PIKFYVEQ9Y2I7 2098 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 PPIL1Q9Y3C6 166 aa10.71□□□□□ -0.69
PNN-203ENST00000554117 IGSF10Q6WRI0 2623 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 BAHCC1Q9P281 2608 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 A0A1W2PQM1 296 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 SSU72P8A0A1W2PR75 194 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 LRRD1A4D1F6 860 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 RGSL1A5PLK6 1076 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 K7ENP7 123 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 APOL1O14791 398 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 HGSO14964 777 aaPredicted RBP10.7□□□□□ -0.7
PNN-203ENST00000554117 NOBOXO60393 691 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 MTA2O94776 668 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 ECEL1O95672 775 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 GYPCP04921 128 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 CEACAM5P06731 702 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 SFTPCP11686 197 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 TCF4P15884 667 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 PDK1Q15118 436 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 NCBP2-AS2Q69YL0 99 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 INO80CQ6PI98 192 aaPredicted RBP10.7□□□□□ -0.7
PNN-203ENST00000554117 XKR5Q6UX68 686 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 ADAMTSL4Q6UY14 1074 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 PHYKPLQ8IUZ5 450 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 TP53INP2Q8IXH6 220 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 PGBD5Q8N414 524 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 FAM71BQ8TC56 605 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 BBC3Q96PG8 261 aaPredicted RBP10.7□□□□□ -0.7
PNN-203ENST00000554117 TSGA13Q96PP4 275 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 FUCA2Q9BTY2 467 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 TDRD1Q9BXT4 1180 aaKnown RBP10.7□□□□□ -0.7
PNN-203ENST00000554117 XPO4Q9C0E2 1151 aaKnown RBP10.7□□□□□ -0.7
PNN-203ENST00000554117 B3GNT4Q9C0J1 378 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 DDX56Q9NY93 547 aaKnown RBP10.7□□□□□ -0.7
PNN-203ENST00000554117 RABGEF1Q9UJ41 708 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 CHKBQ9Y259 395 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 SLC17A4Q9Y2C5 497 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 HEY1Q9Y5J3 304 aa10.7□□□□□ -0.7
PNN-203ENST00000554117 HEMK1Q9Y5R4 338 aaPredicted RBP10.7□□□□□ -0.7
PNN-203ENST00000554117 OR5K4A6NMS3 321 aa10.69□□□□□ -0.7
PNN-203ENST00000554117 STMND1H3BQB6 276 aa10.69□□□□□ -0.7
PNN-203ENST00000554117 INPP4BO15327 924 aa10.69□□□□□ -0.7
PNN-203ENST00000554117 PEX11BO96011 259 aa10.69□□□□□ -0.7
PNN-203ENST00000554117 FGF1P05230 155 aa10.69□□□□□ -0.7
PNN-203ENST00000554117 TMEM253P0C7T8 217 aa10.69□□□□□ -0.7
PNN-203ENST00000554117 LHCGRP22888 699 aa10.69□□□□□ -0.7
PNN-203ENST00000554117 KDELR1P24390 212 aa10.69□□□□□ -0.7
PNN-203ENST00000554117 AK4P27144 223 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms