RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 BIRC2Q13490 618 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 INPP5AQ14642 412 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 SETDB1Q15047 1291 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 MYLK3Q32MK0 819 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 C8orf34Q49A92 452 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 DCAF12Q5T6F0 453 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ANKRD40Q6AI12 368 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 LEKR1Q6ZMV7 388 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ACAD11Q709F0 780 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 RRAGAQ7L523 313 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 TIPARPQ7Z3E1 657 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 TMEM110Q86TL2 294 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 IRF2BP1Q8IU81 584 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 DRC7Q8IY82 874 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 SMYD4Q8IYR2 804 aaPredicted RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ZNF683Q8IZ20 524 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ARMC10Q8N2F6 343 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 GUF1Q8N442 669 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 NETO2Q8NC67 525 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 KIAA1524Q8TCG1 905 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 PDCD6IPQ8WUM4 868 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 PATE1Q8WXA2 126 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 CCDC47Q96A33 483 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 VOPP1Q96AW1 172 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ISG20Q96AZ6 181 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 RTP4Q96DX8 246 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 TCTN2Q96GX1 697 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 TKTL2Q9H0I9 626 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 SUDS3Q9H7L9 328 aaPredicted RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 CYP4F12Q9HCS2 524 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 FGF22Q9HCT0 170 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 MRPL40Q9NQ50 206 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 SPATS2LQ9NUQ6 558 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 DONSONQ9NYP3 566 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 TMEM9Q9P0T7 183 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 TLK1Q9UKI8 766 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 NOVA2Q9UNW9 492 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 KCTD3Q9Y597 815 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 COL6A5A8TX70 2615 aa5.39□□□□□ -1.55
HOXB3-213ENST00000552000 FLNAP21333 2647 aaKnown RBP5.39□□□□□ -1.55
HOXB3-213ENST00000552000 ATRQ13535 2644 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 INTS1Q8N201 2190 aaKnown RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 A0A1B0GVL5 298 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 TMEM202A6NGA9 273 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 DRGXA6NNA5 263 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 A8MU76 341 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 CACNB4O00305 520 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 SLC16A3O15427 465 aaKnown RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 THAP12O43422 761 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 SRGAP2O75044 1071 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 DAB1O75553 588 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 DNAJB5O75953 348 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 STK17BO94768 372 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 GSRP00390 522 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 LDLRP01130 860 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 GLI1P08151 1106 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 THRAP10827 490 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 TFE3P19532 575 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 F8A1P23610 371 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 STAT5AP42229 794 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 FMO5P49326 533 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 PPM1FP49593 454 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 CXCR3P49682 368 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 KIAA1024LP59773 190 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 SNRPD1P62314 119 aaKnown RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 GNA12Q03113 381 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 ABHD18Q0P651 414 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 MTA1Q13330 715 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 MTM1Q13496 603 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 ERV3-1Q14264 604 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 POLD3Q15054 466 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 CLPPQ16740 277 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 NADK2Q4G0N4 442 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 TMEM52BQ4KMG9 183 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 PRR30Q53SZ7 412 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 EFHC1Q5JVL4 640 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 SNAP47Q5SQN1 464 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 OTUD1Q5VV17 481 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 LRRC31Q6UY01 552 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 CEACAM20Q6UY09 585 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 GDPD4Q6W3E5 623 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 ZNF783Q6ZMS7 281 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 FAM183BPQ6ZVS7 135 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 ZNF438Q7Z4V0 828 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 TMEM135Q86UB9 458 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 C17orf82Q86X59 251 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 ZNF761Q86XN6 746 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 ARHGEF19Q8IW93 802 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 POU5F2Q8N7G0 328 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 BMPERQ8N8U9 685 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 PLA2G15Q8NCC3 412 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 OR2AP1Q8NGE2 309 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 OR4D9Q8NGE8 314 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 OR56A4Q8NGH8 313 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 ARHGEF2Q92974 986 aaKnown RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 SLC35C1Q96A29 364 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 FUBP1Q96AE4 644 aaKnown RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 MOCOSQ96EN8 888 aa5.38□□□□□ -1.55
HOXB3-213ENST00000552000 TEFMQ96QE5 360 aaKnown RBP5.38□□□□□ -1.55
HOXB3-213ENST00000552000 CPXM1Q96SM3 734 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms