RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 FAM149AA5PLN7 773 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 PMPCBO75439 489 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 TJP3O95049 919 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 CLDN7O95471 211 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 NDST3O95803 873 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 MT-CYBP00156 380 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 PTMAP06454 111 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 GP1BAP07359 652 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 TNNT3P45378 269 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 E2F1Q01094 437 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 OTUD4Q01804 1114 aaKnown RBP17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 CDK18Q07002 472 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 FAM182AQ5T1J6 154 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 CCDC70Q6NSX1 233 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 RFLNAQ6ZTI6 216 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 NYAP1Q6ZVC0 841 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 KDELC2Q7Z4H8 507 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 GKN2Q86XP6 184 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 CDKL3Q8IVW4 592 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 SLC35F3Q8IY50 421 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 ZNF567Q8N184 647 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 ACTL9Q8TC94 416 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 FRMD8Q9BZ67 464 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 CYP4F12Q9HCS2 524 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 PKD2L2Q9NZM6 624 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 FAM153AQ9UHL3 310 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 MOSPD1Q9UJG1 213 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 TRHDEQ9UKU6 1024 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 COL27A1Q8IZC6 1860 aaPredicted RBP17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 ACACAQ13085 2346 aa17.18■□□□□ 0.34
CHMP1A-208ENST00000550102 YY2O15391 372 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 KRT86O43790 486 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 ZNF189O75820 626 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 STK10O94804 968 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 SOD1P00441 154 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 PYGMP11217 842 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 MYF5P13349 255 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 CD68P34810 354 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 EIF3EP60228 445 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 CDKN3Q16667 212 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 GUSBP11Q6P575 273 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 LYSMD3Q7Z3D4 306 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 RNF10Q8N5U6 811 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 ARL10Q8N8L6 244 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 IFI44Q8TCB0 444 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 ZCCHC14Q8WYQ9 949 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 NAT6Q93015 286 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 SCAMP4Q969E2 229 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 RIOK2Q9BVS4 552 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 MRPL40Q9NQ50 206 aaKnown RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 UBP1Q9NZI7 540 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 RSPH14Q9UHP6 348 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 PACSIN2Q9UNF0 486 aaPredicted RBP17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 ZNF711Q9Y462 761 aa17.17■□□□□ 0.34
CHMP1A-208ENST00000550102 APC2O95996 2303 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 RGSL1A5PLK6 1076 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 ZZEF1O43149 2961 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 SLC4A1P02730 911 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 PIRTP0C851 137 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 JUPP14923 745 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 RBL1P28749 1068 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 SPINT3P49223 89 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 WNT3AP56704 352 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 CLDN6P56747 220 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 INSM1Q01101 510 aaPredicted RBP17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 ITPRIPL1Q6GPH6 555 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 AADACL2Q6P093 401 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 PID1Q7Z2X4 250 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 EFL1Q7Z2Z2 1120 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 NLRP8Q86W28 1048 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 KYQ8NBH2 561 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 FCRL5Q96RD9 977 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 SRPK1Q96SB4 655 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 TMEM168Q9H0V1 697 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 GBA3Q9H227 469 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 CARS2Q9HA77 564 aaKnown RBP17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 MAGEE1Q9HCI5 957 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 SIRPGQ9P1W8 387 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 GPR34Q9UPC5 381 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 SLC17A4Q9Y2C5 497 aa17.16■□□□□ 0.34
CHMP1A-208ENST00000550102 DMXL2Q8TDJ6 3036 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 ASPMQ8IZT6 3477 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 CPED1A4D0V7 1026 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 EME2A4GXA9 379 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 GOLGA6L9A6NEM1 432 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 F5H423 210 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 DDX3YO15523 660 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 NRDCO43847 1150 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 OPA1O60313 960 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 CEACAM5P06731 702 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 IVLP07476 585 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 RBP3P10745 1247 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 DCDC1P59894 354 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 HENMT1Q5T8I9 393 aaKnown RBP17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 DOK6Q6PKX4 331 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 KDELC1Q6UW63 502 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 TAF8Q7Z7C8 310 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 MARCH9Q86YJ5 346 aa17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 KDF1Q8NAX2 398 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-208ENST00000550102 OXNAD1Q96HP4 312 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms