RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 PILRAQ9UKJ1 303 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 NEU3Q9UQ49 428 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 SLC5A6Q9Y289 635 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 ANKRD36A6QL64 1941 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 CSMD2Q7Z408 3487 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 ARHGEF17Q96PE2 2063 aaPredicted RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 A0A1W2PQ67 120 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 HEATR9A2RTY3 570 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 GOLGA6CA6NDK9 693 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 GOLGA6BA6NDN3 693 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 TMEM202A6NGA9 273 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 B4E171 279 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 BUB1BO60566 1050 aaPredicted RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 RNF8O76064 485 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 SORBS2O94875 1100 aaKnown RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 GOLGA6DP0CG33 693 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 CYP2A6P11509 494 aaPredicted RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 NR1D1P20393 614 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 TNFAIP3P21580 790 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 PSMA2P25787 234 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 ALDH4A1P30038 563 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 TSPAN7P41732 249 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 LEPRP48357 1165 aaKnown RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 KLK7P49862 253 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 SCNN1BP51168 640 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 UBXN1Q04323 297 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 NSUN2Q08J23 767 aaKnown RBP eCLIP8.47□□□□□ -1.05
TROAP-208ENST00000548817 PTP4A2Q12974 167 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 RFTN1Q14699 578 aaPredicted RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 KRT31Q15323 416 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 ZXDCQ2QGD7 858 aaPredicted RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 EIF2S3LQ2VIR3 472 aaKnown RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 DCAF12Q5T6F0 453 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 ERMARDQ5T6L9 678 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 TMCO4Q5TGY1 634 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 PNCKQ6P2M8 343 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 LIPIQ6XZB0 460 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 DPPA4Q7L190 304 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 BBS5Q8N3I7 341 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 PLA2G15Q8NCC3 412 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 ZDHHC1Q8WTX9 485 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 PDCD6IPQ8WUM4 868 aaKnown RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 NSMCE1Q8WV22 266 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 TCTN2Q96GX1 697 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 SLC39A8Q9C0K1 460 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 ZMYND15Q9H091 742 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 TMEM168Q9H0V1 697 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 SEMA6CQ9H3T2 930 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 LRRC19Q9H756 370 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 SUDS3Q9H7L9 328 aaPredicted RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 CARS2Q9HA77 564 aaKnown RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 MRPL40Q9NQ50 206 aaKnown RBP8.47□□□□□ -1.05
TROAP-208ENST00000548817 GOLGA6AQ9NYA3 693 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 AP4E1Q9UPM8 1137 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 B3GALT1Q9Y5Z6 326 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 SVILO95425 2214 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 AKAP9Q99996 3911 aa8.47□□□□□ -1.05
TROAP-208ENST00000548817 A0A1B0GTL3 188 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PRSS38A1L453 326 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 A8MX80 341 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 TCP11X1B4DZS4 312 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 K7EM74 188 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PRPSAP2O60256 369 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PRF1P14222 555 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 CCNB1P14635 433 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 FERP16591 822 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 TRIM23P36406 574 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 NOP2P46087 812 aaKnown RBP8.46□□□□□ -1.06
TROAP-208ENST00000548817 ZNF135P52742 658 aaPredicted RBP8.46□□□□□ -1.06
TROAP-208ENST00000548817 PMS2P54278 862 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 OR1D5P58170 312 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 AP1S1P61966 158 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 RPL7AP62424 266 aaKnown RBP8.46□□□□□ -1.06
TROAP-208ENST00000548817 IL10RBQ08334 325 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 HLTFQ14527 1009 aaKnown RBP eCLIP8.46□□□□□ -1.06
TROAP-208ENST00000548817 ZNF235Q14590 738 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PPP6R3Q5H9R7 873 aaPredicted RBP8.46□□□□□ -1.06
TROAP-208ENST00000548817 AFMIDQ63HM1 303 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 DENND2CQ68D51 928 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 ACAD10Q6JQN1 1059 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 MON1BQ7L1V2 547 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 NDUFAF2Q8N183 169 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 TSEN2Q8NCE0 465 aaKnown RBP8.46□□□□□ -1.06
TROAP-208ENST00000548817 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 ART4Q93070 314 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PMEPA1Q969W9 287 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 VOPP1Q96AW1 172 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 NUS1Q96E22 293 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 DPYSL5Q9BPU6 564 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 ZPBPQ9BS86 351 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 SPRY4Q9C004 299 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PDFQ9HBH1 243 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 FGF22Q9HCT0 170 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PARVAQ9NVD7 372 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 GPATCH2LQ9NWQ4 482 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PCSK1NQ9UHG2 260 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 POLHQ9Y253 713 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 PCDHB3Q9Y5E6 796 aa8.46□□□□□ -1.06
TROAP-208ENST00000548817 LRP4O75096 1905 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms