RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TMCO4Q5TGY1 634 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 C16orf46Q6P387 395 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 TMEM71Q6P5X7 295 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ZNF438Q7Z4V0 828 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 OR4D9Q8NGE8 314 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ZNF564Q8TBZ8 553 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 NCSTNQ92542 709 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 HSPH1Q92598 858 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 SCAMP4Q969E2 229 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 DTD2Q96FN9 168 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 PSKH2Q96QS6 385 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ERGIC2Q96RQ1 377 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 SLC38A3Q99624 504 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 EPN3Q9H201 632 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ABCG8Q9H221 673 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 HSD3B7Q9H2F3 369 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ZWILCHQ9H900 591 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 PARVAQ9NVD7 372 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ETNK2Q9NVF9 386 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 MYO1AQ9UBC5 1043 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ZNF106Q9H2Y7 1883 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 HECTD1Q9ULT8 2610 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 BOD1L1Q8NFC6 3051 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 LOC101059948A0A1B0GTJ6 334 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 HTRA2O43464 458 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 MAP3K6O95382 1288 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 EML2O95834 649 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 MBD3O95983 291 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 PDHA1P08559 390 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 THRAP10827 490 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 FERP16591 822 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 GPR3P46089 330 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 NFATC2Q13469 925 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 TRA2AQ13595 282 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 UBAP2LQ14157 1087 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 NR1D2Q14995 579 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 SMTNL2Q2TAL5 461 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 DEFB109BQ30KR1 87 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 APTXQ7Z2E3 356 aaKnown RBP11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 KDELC2Q7Z4H8 507 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 IRF2BP2Q7Z5L9 587 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 AOPEPQ8N6M6 819 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 CCDC112Q8NEF3 446 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 AP2M1Q96CW1 435 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 OR2M4Q96R27 311 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 NUDCD1Q96RS6 583 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 AGAP2Q99490 1192 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 B3GNT4Q9C0J1 378 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 ADNPQ9H2P0 1102 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 GPN2Q9H9Y4 310 aaPredicted RBP11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 APMAPQ9HDC9 416 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 ANKMY1Q9P2S6 941 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 ZNHIT2Q9UHR6 403 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 SLC17A4Q9Y2C5 497 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 PCDHGA3Q9Y5H0 932 aa11.9□□□□□ -0.5
TRAFD1-205ENST00000548277 TMEM191CA6NGB0 347 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 ZNF891A8MT65 544 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 SNX2O60749 519 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 ATP1A1P05023 1023 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 IVLP07476 585 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 ATP1A3P13637 1013 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 TYRO3Q06418 890 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 PYCR3Q53H96 274 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 ARMC12Q5T9G4 340 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 ATP1A1-AS1Q5TC04 95 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 PLEKHA7Q6IQ23 1121 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 CYP4V2Q6ZWL3 525 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 CHST15Q7LFX5 561 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 TIPARPQ7Z3E1 657 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 CBARPQ8N350 705 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 BBS5Q8N3I7 341 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 SLC37A2Q8TED4 501 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 NSMCE1Q8WV22 266 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 RTP4Q96DX8 246 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 SCRN2Q96FV2 425 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 DDA1Q9BW61 102 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 CDH19Q9H159 772 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 NT5MQ9NPB1 228 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 TMEM63CQ9P1W3 806 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 CNOT8Q9UFF9 292 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 PILRAQ9UKJ1 303 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 PCYT1BQ9Y5K3 369 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 SPTA1P02549 2419 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 NBASA2RRP1 2371 aa11.89□□□□□ -0.51
TRAFD1-205ENST00000548277 H3BRJ5 948 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 MAFKO60675 156 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 SOCS5O75159 536 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 LRCH4O75427 683 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 PGLSO95336 258 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 PEX11BO96011 259 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 SOD1P00441 154 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 FTLP02792 175 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 CCDC172P0C7W6 258 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 TCF4P15884 667 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 CR2P20023 1033 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 NFKBIAP25963 317 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 IL1R2P27930 398 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 ARL4AP40617 200 aa11.88□□□□□ -0.51
TRAFD1-205ENST00000548277 MMP13P45452 471 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms