RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 ITPKAP23677 461 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 GJA5P36382 358 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 ATXN1P54253 815 aaKnown RBP9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 TPSAB1Q15661 275 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 STK32AQ8WU08 396 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 ZNF75CPQ92670 426 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 ACDQ96AP0 544 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 PPP3R2Q96LZ3 170 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 YIPF3Q9GZM5 350 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 RERGLQ9H628 205 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 SPATA6Q9NWH7 488 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 SAGE1Q9NXZ1 904 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 STMN3Q9NZ72 180 aa9.03□□□□□ -0.96
MTHFD1-202ENST00000545908 RCCD1A6NED2 376 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 C2CD4BA6NLJ0 364 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 DDX3YO15523 660 aaKnown RBP9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 ITGA2BP08514 1039 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 CD48P09326 243 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 RPL38P63173 70 aaKnown RBP9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 FOXM1Q08050 763 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 SERPINA9Q86WD7 417 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 RDH11Q8TC12 318 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 ANKRD7Q92527 254 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 OLFM3Q96PB7 478 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 SNX15Q9NRS6 342 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 VPS45Q9NRW7 570 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 DNAJC28Q9NX36 388 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 CORO2BQ9UQ03 480 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 NOL4O94818 638 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 CHRNB2P17787 502 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 TAF5Q15542 800 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 UAP1L1Q3KQV9 507 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 BHLHB9Q6PI77 547 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 R3HCC1LQ7Z5L2 792 aaKnown RBP9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 ADI1Q9BV57 179 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 SRMSQ9H3Y6 488 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 DNAJB4Q9UDY4 337 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 CIDEBQ9UHD4 219 aa9.02□□□□□ -0.96
MTHFD1-202ENST00000545908 SCN7AQ01118 1682 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 LINC00032P0C843 101 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 HOXB2P14652 356 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 UPP1Q16831 310 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 EID3Q8N140 333 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 SLC22A17Q8WUG5 538 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 CLP1Q92989 425 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 HERC2P3Q9BVR0 1158 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 EBF3Q9H4W6 596 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 ELAC1Q9H777 363 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 L2HGDHQ9H9P8 463 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 MTMR11A4FU01 709 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 LRCH4O75427 683 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 ERN1O75460 977 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 GOT2P00505 430 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 GALTP07902 379 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 LBPP18428 481 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 LAPTM5Q13571 262 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 AMZ1Q400G9 498 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 ZNF776Q68DI1 518 aaPredicted RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 RNF44Q7L0R7 432 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 KYQ8NBH2 561 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 PRRG4Q9BZD6 226 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 LIMD1Q9UGP4 676 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 DMGDHQ9UI17 866 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 MRTO4Q9UKD2 239 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 MRPS33Q9Y291 106 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 M0R2N6 131 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 HSPA13P48723 471 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 ST13P50502 369 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 FRG1Q14331 258 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 USP39Q53GS9 565 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 PLD5Q8N7P1 536 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 FNIP1Q8TF40 1166 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 LCN9Q8WX39 176 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 TBCDQ9BTW9 1192 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 POLE3Q9NRF9 147 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 GRIN2DO15399 1336 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 M0R3G1 203 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 GMFGO60234 142 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 AP2A1O95782 977 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 ADH1BP00325 375 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 HLA-DQA2P01906 255 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 FCGR1AP12314 374 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 TYRP14679 529 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 CDKN2BP42772 138 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 AVPR1BP47901 424 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 LIPMQ5VYY2 423 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 ZNF662Q6ZS27 426 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 OSTM1Q86WC4 334 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 RASGRP3Q8IV61 690 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 SPATA22Q8NHS9 363 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 OVCA2Q8WZ82 227 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 IRF7Q92985 503 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 SIPA1Q96FS4 1042 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 OXNAD1Q96HP4 312 aaPredicted RBP9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 PCYT2Q99447 389 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 SEPHS2Q99611 448 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 OSBPL6Q9BZF3 934 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 CDH19Q9H159 772 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 CAB39LQ9H9S4 337 aa9.02□□□□□ -0.97
MTHFD1-202ENST00000545908 SUCOQ9UBS9 1254 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms