RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CAMPP49913 170 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 HSD17B4P51659 736 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 RHAGQ02094 409 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ACSM2AQ08AH3 577 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ITGADQ13349 1161 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 OLIG2Q13516 323 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 IRF3Q14653 427 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 DRAP1Q14919 205 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 KYNUQ16719 465 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ME3Q16798 604 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ALG10Q5BKT4 473 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ALG10BQ5I7T1 473 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ACSM2BQ68CK6 577 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 RBM44Q6ZP01 1051 aaKnown RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 CCDC91Q7Z6B0 441 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 TFAP2DQ7Z6R9 452 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 SNX32Q86XE0 403 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 UNC5CLQ8IV45 518 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 THNSL1Q8IYQ7 743 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 TTC30BQ8N4P2 665 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 TMEM217Q8N7C4 229 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 OR52N4Q8NGI2 321 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 RASSF8Q8NHQ8 419 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 VPS33AQ96AX1 596 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 SLC22A18Q96BI1 424 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 RMDN1Q96DB5 314 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ARHGEF26Q96DR7 871 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 VCPIP1Q96JH7 1222 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ZFYVE19Q96K21 471 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 HARBI1Q96MB7 349 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 JAKMIP1Q96N16 626 aaKnown RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ANP32EQ9BTT0 268 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 TRMOQ9BU70 441 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 SCNM1Q9BWG6 230 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 EDEM3Q9BZQ6 932 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 HIPK3Q9H422 1215 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 CXorf56Q9H5V9 222 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 ACTR5Q9H9F9 607 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 RANGRFQ9HD47 186 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 PAPOLBQ9NRJ5 636 aaKnown RBP4.33□□□□□ -1.72
SNHG1-217ENST00000541578 HEY2Q9UBP5 337 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 FBXL17Q9UF56 701 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 CLDN16Q9Y5I7 305 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 HS3ST3B1Q9Y662 390 aa4.33□□□□□ -1.72
SNHG1-217ENST00000541578 SPHKAPQ2M3C7 1700 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 MARF1Q9Y4F3 1742 aaKnown RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 NHSL1Q5SYE7 1610 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 DIP2AQ14689 1571 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 MAST1Q9Y2H9 1570 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 MYOM3Q5VTT5 1437 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 PNPLA6Q8IY17 1366 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 A0A096LPK6 155 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 C17orf100A8MU93 164 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 A8MZ25 164 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 UBE2CO00762 179 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ATP2C2O75185 946 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 TPPPO94811 219 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 TMCC1O94876 653 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 OR2C1O95371 312 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 NTN1O95631 604 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 MT-CYBP00156 380 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 HEXAP06865 529 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 QDPRP09417 244 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ST6GAL1P15907 406 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 HOXA7P31268 230 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 RFC1P35251 1148 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 IDUAP35475 653 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 CLCNKBP51801 687 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 SLC12A2P55011 1212 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 HDAC4P56524 1084 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 PSMC6P62333 389 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 PPARDQ03181 441 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 SRSF1Q07955 248 aaKnown RBP eCLIP4.32□□□□□ -1.725e-12■■□□□ 12.5
SNHG1-217ENST00000541578 FHL1Q13642 323 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 FGFBP1Q14512 234 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 RPE65Q16518 533 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 TCTN1Q2MV58 587 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 COL28A1Q2UY09 1125 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 PLK5Q496M5 336 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 TXNDC8Q6A555 127 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ADALQ6DHV7 355 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 SHQ1Q6PI26 577 aaKnown RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ZNF793Q6ZN11 406 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 FAM57BQ71RH2 274 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 RTL10Q7L3V2 364 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 CHST3Q7LGC8 479 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 CCDC186Q7Z3E2 898 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 DNAJB7Q7Z6W7 309 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ADGRA1Q86SQ6 560 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 PIP4P1Q86T03 277 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 RFX6Q8HWS3 928 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ADGRF4Q8IZF3 695 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 FAM185AQ8N0U4 392 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ARFGAP1Q8N6T3 406 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 OR6J1Q8NGC5 347 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 AFAP1L1Q8TED9 768 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ZFPM2Q8WW38 1151 aa4.32□□□□□ -1.72
SNHG1-217ENST00000541578 ATOH1Q92858 354 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-217ENST00000541578 SIPA1Q96FS4 1042 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms