RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 CELF5Q8N6W0 485 aaKnown RBP14.08□□□□□ -0.16
USP3-204ENST00000540797 FPGTO14772 594 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 MYBL2P10244 700 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 CARD16Q5EG05 197 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 TMPRSS11BQ86T26 416 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 GPR180Q86V85 440 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 PHC3Q8NDX5 983 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 ZSCAN18Q8TBC5 510 aaPredicted RBP14.08□□□□□ -0.16
USP3-204ENST00000540797 FBXL18Q96ME1 805 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 OSBPL6Q9BZF3 934 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 ZNF711Q9Y462 761 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 A0A1W2PPM1 405 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 PIPSLA2A3N6 862 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 NR2F1P10589 423 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 CYP4F2P78329 520 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 BIKQ13323 160 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 PDK4Q16654 411 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 GDAP2Q9NXN4 497 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 VPS4AQ9UN37 437 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 SORCS3Q9UPU3 1222 aa14.08□□□□□ -0.16
USP3-204ENST00000540797 INPPL1O15357 1258 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 FYNP06241 537 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 ADH5P11766 374 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 PIK3R1P27986 724 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 RFTN1Q14699 578 aaPredicted RBP14.07□□□□□ -0.16
USP3-204ENST00000540797 TSTD2Q5T7W7 516 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 SERPINA9Q86WD7 417 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 TSTD1Q8NFU3 115 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 ACDQ96AP0 544 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 CENPTQ96BT3 561 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 IL12RB2Q99665 862 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 TTYH3Q9C0H2 523 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 ATP6AP2A0A1C7CYW4 349 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 ATP6AP2O75787 350 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 RECQL5O94762 991 aaPredicted RBP14.07□□□□□ -0.16
USP3-204ENST00000540797 TIE1P35590 1138 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 GSSP48637 474 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 VEGFBP49765 207 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 CCR3P51677 355 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 HK2P52789 917 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 ECT2LQ008S8 904 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 C1DQ13901 141 aaKnown RBP14.07□□□□□ -0.16
USP3-204ENST00000540797 ZNF549Q6P9A3 640 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 LRRC57Q8N9N7 239 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 SLC22A17Q8WUG5 538 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 KCTD13Q8WZ19 329 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 NTAN1Q96AB6 310 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 TWNKQ96RR1 684 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 SPATA5L1Q9BVQ7 753 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 TRIT1Q9H3H1 467 aaKnown RBP14.07□□□□□ -0.16
USP3-204ENST00000540797 ANGPT4Q9Y264 503 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 LRATO95237 230 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 GATMP50440 423 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 USP4Q13107 963 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 GPR17Q13304 367 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 LSM12Q3MHD2 195 aaKnown RBP14.07□□□□□ -0.16
USP3-204ENST00000540797 SLC39A4Q6P5W5 647 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 GCNT7Q6ZNI0 430 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 FBXO30Q8TB52 745 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 POF1BQ8WVV4 589 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 C16orf70Q9BSU1 422 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 ATP6V1HQ9UI12 483 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 CORO2BQ9UQ03 480 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 MTF2Q9Y483 593 aaPredicted RBP14.07□□□□□ -0.16
USP3-204ENST00000540797 RHPN2P1A8MT19 583 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 ENPP3O14638 875 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 PRKG2Q13237 762 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 SLC44A1Q8WWI5 657 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 MFSD3Q96ES6 412 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 OSBPL10Q9BXB5 764 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 REEP1Q9H902 201 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 FKBPLQ9UIM3 349 aa14.07□□□□□ -0.16
USP3-204ENST00000540797 GOT2P00505 430 aaKnown RBP14.06□□□□□ -0.16
USP3-204ENST00000540797 SOD2P04179 222 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 PAICSP22234 425 aaKnown RBP14.06□□□□□ -0.16
USP3-204ENST00000540797 MBLAC2Q68D91 279 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 TRMOQ9BU70 441 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 MMADHCQ9H3L0 296 aaPredicted RBP14.06□□□□□ -0.16
USP3-204ENST00000540797 DTLQ9NZJ0 730 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 DLGAP2Q9P1A6 1054 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 COL6A2P12110 1019 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 NAE1Q13564 534 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 DPYSL2Q16555 572 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 TYW3Q6IPR3 259 aaKnown RBP14.06□□□□□ -0.16
USP3-204ENST00000540797 EXOC3L1Q86VI1 746 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 HID1Q8IV36 788 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 OR6Y1Q8NGX8 325 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 ZNF461Q8TAF7 563 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 BRSK1Q8TDC3 778 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 KLK6Q92876 244 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 PPCDCQ96CD2 204 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 C8orf48Q96LL4 319 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 TEKT5Q96M29 485 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 HIST1H2ABP04908 130 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 HSMCR30P0CW71 290 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 DGKEP52429 567 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 MPP1Q00013 466 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 MAMDC4Q6UXC1 1216 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 IZUMO2Q6UXV1 221 aa14.06□□□□□ -0.16
USP3-204ENST00000540797 HIST3H2AQ7L7L0 130 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms