RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 HERC6Q8IVU3 1022 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 HDAC10Q969S8 669 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 FUBP3Q96I24 572 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 AGAP2Q99490 1192 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 ZFP14Q9HCL3 533 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TLR8Q9NR97 1041 aaKnown RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 MPP6Q9NZW5 540 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TEKT2Q9UIF3 430 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 VPS28Q9UK41 221 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 PRPF19Q9UMS4 504 aaKnown RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 FFAR3O14843 346 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 GPR42O15529 346 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 MFN2O95140 757 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 OAZ2O95190 189 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 COL6A1P12109 1028 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 PTPN3P26045 913 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 HCAR3P49019 387 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 DUSP4Q13115 394 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 GRM3Q14832 879 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 PRKD1Q15139 912 aaPredicted RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 FSTL4Q6MZW2 842 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 LPGAT1Q92604 370 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 PGAP3Q96FM1 320 aaPredicted RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 HCSTQ9UBK5 93 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 U3KQV3 271 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 GNG14A0A1W2PPG7 69 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 CFAP99D6REC4 459 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 NRP2O60462 931 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 GCAP28676 217 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 ACTR3P61158 418 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 FAM189BP81408 668 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TRIM25Q14258 630 aaKnown RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 ZNF460Q14592 562 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TIGD2Q4W5G0 525 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 EID3Q8N140 333 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 SPATA22Q8NHS9 363 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TPD52L3Q96J77 140 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 KLHL5Q96PQ7 755 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 RTKNQ9BST9 563 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 STN1Q9H668 368 aaKnown RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 NMUR1Q9HB89 426 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 SCUBE2Q9NQ36 999 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 SH3BP4Q9P0V3 963 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TAF10Q12962 218 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 LSM12Q3MHD2 195 aaKnown RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 CARNMT1Q8N4J0 409 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 ZNF276Q8N554 614 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 NPWQ8N729 165 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 DCAKDQ8WVC6 231 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 VPS33AQ96AX1 596 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 PTCD3Q96EY7 689 aaKnown RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 FOPNLQ96NB1 174 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TTPALQ9BTX7 342 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 ABCG8Q9H221 673 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 GIMAP4Q9NUV9 329 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 USE1Q9NZ43 259 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 MARCH2Q9P0N8 246 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 FGF10O15520 208 aaPredicted RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 ITM2AO43736 263 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 RTN3O95197 1032 aaPredicted RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 NTRK1P04629 796 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 CHRNGP07510 517 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 USP46P62068 366 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 NRG1Q02297 640 aaPredicted RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 CLEC6AQ6EIG7 209 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 PRSS55Q6UWB4 352 aaPredicted RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 ARHGAP36Q6ZRI8 547 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 LZTR1Q8N653 840 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 TTC9BQ8N6N2 239 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 NAT14Q8WUY8 206 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 ERLEC1Q96DZ1 483 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 MTERF3Q96E29 417 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 HBEGFQ99075 208 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 SH3GL1Q99961 368 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 MRPL57Q9BQC6 102 aaKnown RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 WDR83Q9BRX9 315 aaKnown RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 SMOC2Q9H3U7 446 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 RHOJQ9H4E5 214 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 FETUBQ9UGM5 382 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 MTF2Q9Y483 593 aaPredicted RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 TRAF6Q9Y4K3 522 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 LOC100506127A0A0U1RQW1 187 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 RHOCP08134 193 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 IDH3AP50213 366 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 RAP1GDS1P52306 607 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 RHOAP61586 193 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 TEX44Q53QW1 395 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 PLEKHG4Q58EX7 1191 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 ANKS3Q6ZW76 656 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 GLT6D1Q7Z4J2 308 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 SPPL2CQ8IUH8 684 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 OR56A4Q8NGH8 313 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 TEX12Q9BXU0 123 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 MRPS26Q9BYN8 205 aaKnown RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 REXO4Q9GZR2 422 aaKnown RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 OSBPL2Q9H1P3 480 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 ELAC1Q9H777 363 aaKnown RBP9.97□□□□□ -0.81
TRAF1-202ENST00000540010 ATP13A1Q9HD20 1204 aa9.97□□□□□ -0.81
TRAF1-202ENST00000540010 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms