RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SLC17A4Q9Y2C5 497 aa17.15■□□□□ 0.34
SFSWAP-205ENST00000537164 FUCA1P04066 466 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 NAP1L1P55209 391 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 CLDN6P56747 220 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 RWDD2BP57060 319 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 CDK18Q07002 472 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 KIF5AQ12840 1032 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 TARDBPQ13148 414 aaKnown RBP eCLIP17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 NOMO1Q15155 1222 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 RAET1GQ6H3X3 334 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 GUSBP11Q6P575 273 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 OGFOD3Q6PK18 319 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 B4GALNT4Q76KP1 1039 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 RD3Q7Z3Z2 195 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 KIAA1328Q86T90 577 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 PROSER1Q86XN7 944 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 ARL10Q8N8L6 244 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 ALG3Q92685 438 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 NAT6Q93015 286 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 SCAMP4Q969E2 229 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 COX14Q96I36 57 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 WDR24Q96S15 920 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 HERPUD2Q9BSE4 406 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 CCDC86Q9H6F5 360 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 MAGEE1Q9HCI5 957 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 SCN8AQ9UQD0 1980 aa17.14■□□□□ 0.33
SFSWAP-205ENST00000537164 ZFC3H1O60293 1989 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 C1orf232A0A0U1RR37 186 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 TAF4O00268 1085 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 MT-CYBP00156 380 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 EPOP01588 193 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 GPR1P46091 355 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 SPINT3P49223 89 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 FAM182AQ5T1J6 154 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 HENMT1Q5T8I9 393 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 ZC3H18Q86VM9 953 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 GPR156Q8NFN8 814 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 SPATA22Q8NHS9 363 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 GPBAR1Q8TDU6 330 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 HTR3CQ8WXA8 447 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 EID2BQ96D98 161 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 OSBPL8Q9BZF1 889 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 NRSN2Q9GZP1 204 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 TMEM168Q9H0V1 697 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 CYP4F12Q9HCS2 524 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 TRNAU1APQ9NX07 287 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 NFKBIL1Q9UBC1 381 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 CD84Q9UIB8 345 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 PADI4Q9UM07 663 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 DOLKQ9UPQ8 538 aa17.13■□□□□ 0.33
SFSWAP-205ENST00000537164 LOC285095A0A1B0GVY8 99 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 MIF4GDA9UHW6 222 aaKnown RBP17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 NDST3O95803 873 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 MT-CO3P00414 261 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 IVLP07476 585 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 GSDMDP57764 484 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 GALNT3Q14435 633 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 RTP5Q14D33 572 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 KDELC1Q6UW63 502 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 EFL1Q7Z2Z2 1120 aaKnown RBP17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 SYCE1Q8N0S2 351 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 ZNF567Q8N184 647 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 OR6C4Q8NGE1 309 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 WDR48Q8TAF3 677 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 CCHCR1Q8TD31 782 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 UBE2Q2Q8WVN8 375 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 FCRL5Q96RD9 977 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 AGAP2Q99490 1192 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 DESI2Q9BSY9 194 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 RIOK2Q9BVS4 552 aaKnown RBP17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 CDH19Q9H159 772 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 ZFYVE1Q9HBF4 777 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 PKD2L2Q9NZM6 624 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 FAM153AQ9UHL3 310 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 TRHDEQ9UKU6 1024 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 AMFRQ9UKV5 643 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 GPR34Q9UPC5 381 aa17.12■□□□□ 0.33
SFSWAP-205ENST00000537164 A0A0U1RQJ8 604 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 CPED1A4D0V7 1026 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 SRRM3A6NNA2 597 aaPredicted RBP17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 PYGMP11217 842 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 NFKB1P19838 968 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 DCDC1P59894 354 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 PERM1Q5SV97 790 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 LYSMD3Q7Z3D4 306 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 PEX26Q7Z412 305 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 TMC3Q7Z5M5 1100 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 NRROSQ86YC3 692 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 RNF10Q8N5U6 811 aaKnown RBP17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 KYQ8NBH2 561 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 MDM1Q8TC05 714 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 ACTL9Q8TC94 416 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 MAPK15Q8TD08 544 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 HAUS1Q96CS2 278 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 HIC2Q96JB3 615 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 FAM83DQ9H4H8 585 aa17.11■□□□□ 0.33
SFSWAP-205ENST00000537164 CARS2Q9HA77 564 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms