RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 CNOT8Q9UFF9 292 aaKnown RBP8.39□□□□□ -1.07
RPUSD4-209ENST00000534393 PCDHGC4Q9Y5F7 938 aa8.39□□□□□ -1.07
RPUSD4-209ENST00000534393 HEMK1Q9Y5R4 338 aaPredicted RBP8.39□□□□□ -1.07
RPUSD4-209ENST00000534393 BZW2Q9Y6E2 419 aaKnown RBP8.39□□□□□ -1.07
RPUSD4-209ENST00000534393 NAV2Q8IVL1 2488 aa8.39□□□□□ -1.07
RPUSD4-209ENST00000534393 PRAMEF33A0A0G2JMD5 474 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 STMND1H3BQB6 276 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ATMINO43313 823 aaPredicted RBP8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 B4GAT1O43505 415 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 SLC28A2O43868 658 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ZNF500O60304 480 aaPredicted RBP8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 MAFKO60675 156 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 PRAMEF10O60809 474 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 NDUFA10O95299 355 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 IPO7O95373 1038 aaKnown RBP8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 FGF1P05230 155 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 CEACAM5P06731 702 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 IVLP07476 585 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 CCDC175P0C221 793 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 GM2AP17900 193 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ITIH1P19827 911 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 CES1P23141 567 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ALDH4A1P30038 563 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 MAPK10P53779 464 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 CDK3Q00526 305 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 B4GALNT1Q00973 533 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 SQSTM1Q13501 440 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 PIGHQ14442 188 aaPredicted RBP8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 SPA17Q15506 151 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 TGIF1Q15583 401 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 CNGA3Q16281 694 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ARMC12Q5T9G4 340 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 HGSNATQ68CP4 663 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 RAET1GQ6H3X3 334 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ARHGAP36Q6ZRI8 547 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 POLNQ7Z5Q5 900 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 NLRP8Q86W28 1048 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 DTX1Q86Y01 620 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ATPAF2Q8N5M1 289 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 TEKT4Q8WW24 435 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 USP7Q93009 1102 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ZNF653Q96CK0 615 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 TAAR9Q96RI9 348 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 MCCC1Q96RQ3 725 aaPredicted RBP8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 SEMA3CQ99985 751 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 MGME1Q9BQP7 344 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 FRMD8Q9BZ67 464 aaPredicted RBP8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 ASPSCR1Q9BZE9 553 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 NOD2Q9HC29 1040 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 SPATS2LQ9NUQ6 558 aaKnown RBP8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 TAAR2Q9P1P5 351 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 RCOR3Q9P2K3 495 aaPredicted RBP8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 DNPEPQ9ULA0 475 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 SLC17A4Q9Y2C5 497 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 PPP2R2CQ9Y2T4 447 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 PPIL1Q9Y3C6 166 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 PCDHGA3Q9Y5H0 932 aa8.38□□□□□ -1.07
RPUSD4-209ENST00000534393 SSU72P8A0A1W2PR75 194 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 GOLGA6CA6NDK9 693 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 GOLGA6BA6NDN3 693 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 USP27XA6NNY8 438 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 C9orf172C9J069 976 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 PGLSO95336 258 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 WISP1O95388 367 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ECEL1O95672 775 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 GOLGA6DP0CG33 693 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ZNF30P17039 623 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 CA4P22748 312 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 AMPD1P23109 780 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 CSTF2P33240 577 aaKnown RBP eCLIP8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ETV3P41162 512 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 MMP13P45452 471 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 GPR1P46091 355 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 GNPDA1P46926 289 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ATP1A2P50993 1020 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 LIMK2P53671 638 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 OR1D5P58170 312 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 GPLD1P80108 840 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 LRP8Q14114 963 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 AMZ1Q400G9 498 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 DENND2CQ68D51 928 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 KCTD16Q68DU8 428 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 SLC30A9Q6PML9 568 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ADAMTSL4Q6UY14 1074 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 NYAP1Q6ZVC0 841 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 Q6ZVL8 140 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 CYP4V2Q6ZWL3 525 aaPredicted RBP8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 PRICKLE2Q7Z3G6 844 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ZNF571Q7Z3V5 609 aaPredicted RBP8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 HSD11B1LQ7Z5J1 315 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 NRSN1Q8IZ57 195 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 AGBL5Q8NDL9 886 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ACRBPQ8NEB7 543 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 OR4D9Q8NGE8 314 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 CCL4L1Q8NHW4 92 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 SCARF2Q96GP6 870 aaPredicted RBP8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 CSPG4P5Q96PW8 444 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 ISCUQ9H1K1 167 aa8.37□□□□□ -1.07
RPUSD4-209ENST00000534393 SEMA6CQ9H3T2 930 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms