RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 C17orf102A2RUQ5 167 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 CNTN5O94779 1100 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 HMBSP08397 361 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 HSPA8P11142 646 aaKnown RBP19.31■□□□□ 0.68
CAPN1-226ENST00000533820 DNAJB2P25686 324 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 TUFMP49411 452 aaKnown RBP19.31■□□□□ 0.68
CAPN1-226ENST00000533820 TXNL4AP83876 142 aaKnown RBP19.31■□□□□ 0.68
CAPN1-226ENST00000533820 ZNF678Q5SXM1 525 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 TMEM86AQ8N2M4 240 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 BRI3BPQ8WY22 251 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 HMCESQ96FZ2 354 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 FAR2Q96K12 515 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 CEP295NLQ96MC4 621 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 FLRT1Q9NZU1 646 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 ANGPT2O15123 496 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 SLC5A3P53794 718 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 CD300CQ08708 224 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 IRGQQ8WZA9 623 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 ESAMQ96AP7 390 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 FBXL20Q96IG2 436 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 PNPLA3Q9NST1 481 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 UXTQ9UBK9 157 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-226ENST00000533820 TSR3Q9UJK0 312 aaKnown RBP19.31■□□□□ 0.68
CAPN1-226ENST00000533820 GFAPP14136 432 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 IMPDH1P20839 514 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 ADAM17P78536 824 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 ACAP2Q15057 778 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 Q6ZNX1 250 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 PLEKHH3Q7Z736 793 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 SIX5Q8N196 739 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 PSMG2Q969U7 264 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 CCDC126Q96EE4 140 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 UBXN10Q96LJ8 280 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 SEMA4BQ9NPR2 832 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-226ENST00000533820 MRPL40Q9NQ50 206 aaKnown RBP19.31■□□□□ 0.68
CAPN1-226ENST00000533820 TBCCD1Q9NVR7 557 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 ARL5AQ9Y689 179 aa19.31■□□□□ 0.68
CAPN1-226ENST00000533820 INPP4BO15327 924 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 YAP1P46937 504 aaKnown RBP19.3■□□□□ 0.68
CAPN1-226ENST00000533820 EIF2B2P49770 351 aaKnown RBP19.3■□□□□ 0.68
CAPN1-226ENST00000533820 CLCN5P51795 746 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 KPNA1P52294 538 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-226ENST00000533820 DIO3P55073 304 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 CAMK2BQ13554 666 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 RABL3Q5HYI8 236 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 AGMOQ6ZNB7 445 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 SLC38A7Q9NVC3 462 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 RABL2AQ9UBK7 228 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-226ENST00000533820 ITGB1BP2Q9UKP3 347 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 CDC14AQ9UNH5 594 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 USP22Q9UPT9 525 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 CLEC11AQ9Y240 323 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 PLXNB2O15031 1838 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 A0A1W2PQH9 124 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 BAIAP3O94812 1187 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 CDK14O94921 469 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 CAPNS1P04632 268 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 HGFP14210 728 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 GPX3P22352 226 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 GRB14Q14449 540 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 PSMD5Q16401 504 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 NHSL2Q5HYW2 709 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 KDELC1Q6UW63 502 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 BBS5Q8N3I7 341 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 MUC3BQ9H195 1237 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 NOL6Q9H6R4 1146 aaKnown RBP19.3■□□□□ 0.68
CAPN1-226ENST00000533820 OAZ3Q9UMX2 235 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 FAM50BQ9Y247 325 aa19.3■□□□□ 0.68
CAPN1-226ENST00000533820 UBA6A0AVT1 1052 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-226ENST00000533820 DHRS12A0PJE2 317 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 S1PR4O95977 384 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 LEPRP48357 1165 aaKnown RBP19.29■□□□□ 0.68
CAPN1-226ENST00000533820 PLIN5Q00G26 463 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 PCBP1Q15365 356 aaKnown RBP eCLIP19.29■□□□□ 0.681e-8■■■■■ 32.7
CAPN1-226ENST00000533820 ALFQ53S48 1182 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 EPHX4Q8IUS5 362 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 PCYOX1LQ8NBM8 494 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 TWIST2Q8WVJ9 160 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 TSPAN17Q96FV3 270 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 PRKD2Q9BZL6 878 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 CLK4Q9HAZ1 481 aaKnown RBP19.29■□□□□ 0.68
CAPN1-226ENST00000533820 TBX18O95935 607 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 ENTPD1P49961 510 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 GALNT3Q14435 633 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 OR4D1Q15615 310 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 USP41Q3LFD5 358 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 MARC1Q5VT66 337 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 OR13C4Q8NGS5 318 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 CALML6Q8TD86 181 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 B3GALT6Q96L58 329 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 TCF12Q99081 682 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 AGO3Q9H9G7 860 aaKnown RBP19.29■□□□□ 0.68
CAPN1-226ENST00000533820 SP110Q9HB58 689 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 TBC1D13Q9NVG8 400 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 ABI2Q9NYB9 513 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-226ENST00000533820 THEGQ9P2T0 379 aa19.29■□□□□ 0.68
CAPN1-226ENST00000533820 CNOT11Q9UKZ1 510 aaKnown RBP19.29■□□□□ 0.68
CAPN1-226ENST00000533820 TRAP1Q12931 704 aaKnown RBP19.28■□□□□ 0.68
CAPN1-226ENST00000533820 SIRPB2Q5JXA9 342 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 SCD5Q86SK9 330 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms