RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 TSPAN33Q86UF1 283 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 PHF13Q86YI8 300 aaPredicted RBP12.98□□□□□ -0.33
COPB1-209ENST00000533096 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.98□□□□□ -0.33
COPB1-209ENST00000533096 SLC37A2Q8TED4 501 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 ELMO2Q96JJ3 720 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 SMIM14Q96QK8 99 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 OR2M4Q96R27 311 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 DPYSL5Q9BPU6 564 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 EFHD1Q9BUP0 239 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 AP4E1Q9UPM8 1137 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 TP53TG5Q9Y2B4 290 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.97□□□□□ -0.33
COPB1-209ENST00000533096 POLR1CO15160 346 aaPredicted RBP12.97□□□□□ -0.33
COPB1-209ENST00000533096 INPP4BO15327 924 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 EML2O95834 649 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 IVLP07476 585 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 AIF1P55008 147 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 MAXP61244 160 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 AP1S1P61966 158 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 GPLD1P80108 840 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 MC1RQ01726 317 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 IL10RBQ08334 325 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 ITKQ08881 620 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 ZNF235Q14590 738 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 RFTN1Q14699 578 aaPredicted RBP12.97□□□□□ -0.33
COPB1-209ENST00000533096 ERMARDQ5T6L9 678 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 RFX8Q6ZV50 586 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 ARHGAP12Q8IWW6 846 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 BMPERQ8N8U9 685 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 STARD8Q92502 1023 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 SCAMP4Q969E2 229 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 AP2M1Q96CW1 435 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 DTD2Q96FN9 168 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 TEFMQ96QE5 360 aaKnown RBP12.97□□□□□ -0.33
COPB1-209ENST00000533096 KCTD15Q96SI1 283 aaPredicted RBP12.97□□□□□ -0.33
COPB1-209ENST00000533096 AGPAT1Q99943 283 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 SPRY4Q9C004 299 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 NOD2Q9HC29 1040 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 PHTF1Q9UMS5 762 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 SLC17A4Q9Y2C5 497 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
COPB1-209ENST00000533096 TTLL8A6PVC2 850 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 AGFG2O95081 481 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 TPM2P07951 284 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 PSMA2P25787 234 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 MAN1A1P33908 653 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 COPB1P53618 953 aaKnown RBP12.96□□□□□ -0.33
COPB1-209ENST00000533096 JAM2P57087 298 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 HHEXQ03014 270 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 ABHD18Q0P651 414 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 PYCR3Q53H96 274 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 FKBP15Q5T1M5 1219 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 ASB18Q6ZVZ8 466 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 CHST15Q7LFX5 561 aaPredicted RBP12.96□□□□□ -0.33
COPB1-209ENST00000533096 ARHGAP22Q7Z5H3 698 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 GALNT13Q8IUC8 556 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 CBARPQ8N350 705 aaPredicted RBP12.96□□□□□ -0.33
COPB1-209ENST00000533096 PGBD5Q8N414 524 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 LZTR1Q8N653 840 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 NPWQ8N729 165 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 PSKH2Q96QS6 385 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 AGAP2Q99490 1192 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 ABCG8Q9H221 673 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 FBXO8Q9NRD0 319 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 KCTD5Q9NXV2 234 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 DACH1Q9UI36 760 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 RPS6KL1Q9Y6S9 549 aa12.96□□□□□ -0.33
COPB1-209ENST00000533096 ZFC3H1O60293 1989 aaKnown RBP12.95□□□□□ -0.34
COPB1-209ENST00000533096 CLEC18AA5D8T8 446 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 NPIPB15A6NHN6 443 aaPredicted RBP12.95□□□□□ -0.34
COPB1-209ENST00000533096 MKRN2OSH3BPM6 223 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 VPS4BO75351 444 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 ATP1A1P05023 1023 aaKnown RBP12.95□□□□□ -0.34
COPB1-209ENST00000533096 LHCGRP22888 699 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 F8A1P23610 371 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 NFKBIAP25963 317 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 EEF1GP26641 437 aaKnown RBP12.95□□□□□ -0.34
COPB1-209ENST00000533096 HTR7P34969 479 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 DLSTP36957 453 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 UBE2HP62256 183 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 TRAF2Q12933 501 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 TMCO4Q5TGY1 634 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 ACAD10Q6JQN1 1059 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 CLEC18BQ6UXF7 455 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 MCOLN2Q8IZK6 566 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 CLEC18CQ8NCF0 446 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 MIB2Q96AX9 1013 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 SCRN2Q96FV2 425 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 RIOK2Q9BVS4 552 aaKnown RBP12.95□□□□□ -0.34
COPB1-209ENST00000533096 TBC1D10AQ9BXI6 508 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 TRIT1Q9H3H1 467 aaKnown RBP12.95□□□□□ -0.34
COPB1-209ENST00000533096 PDP2Q9P2J9 529 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 VPS4AQ9UN37 437 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 KCNK6Q9Y257 313 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 KCNMB2Q9Y691 235 aa12.95□□□□□ -0.34
COPB1-209ENST00000533096 A0A1W2PQ67 120 aa12.94□□□□□ -0.34
COPB1-209ENST00000533096 TCRBV5S1A1TA0A578 114 aa12.94□□□□□ -0.34
COPB1-209ENST00000533096 PIPSLA2A3N6 862 aa12.94□□□□□ -0.34
COPB1-209ENST00000533096 CDC14CA4D256 554 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms