RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 NCBP2-AS2Q69YL0 99 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 RFLNAQ6ZTI6 216 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 USP53Q70EK8 1073 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 MAP7D3Q8IWC1 876 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 CBARPQ8N350 705 aaPredicted RBP17.76■□□□□ 0.43
PCF11-206ENST00000533018 PTCD2Q8WV60 388 aaKnown RBP17.76■□□□□ 0.43
PCF11-206ENST00000533018 TMEM159Q96B96 161 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 SMIM14Q96QK8 99 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 SEMA6CQ9H3T2 930 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 AKAP7Q9P0M2 348 aaPredicted RBP17.76■□□□□ 0.43
PCF11-206ENST00000533018 IFNKQ9P0W0 207 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 CHKBQ9Y259 395 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 TMEM98Q9Y2Y6 226 aa17.76■□□□□ 0.43
PCF11-206ENST00000533018 ZFC3H1O60293 1989 aaKnown RBP17.75■□□□□ 0.43
PCF11-206ENST00000533018 CAPN8A6NHC0 703 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 MATN3O15232 486 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 CPNE6O95741 557 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 CA4P22748 312 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 CASP14P31944 242 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 ADCY8P40145 1251 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 ACTR1BP42025 376 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 ACTR1AP61163 376 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 B4GALNT1Q00973 533 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 DSC2Q02487 901 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 PTSQ03393 145 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 DPTQ07507 201 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 GALNT2Q10471 571 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 TGIF1Q15583 401 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 IFI16Q16666 785 aaKnown RBP17.75■□□□□ 0.43
PCF11-206ENST00000533018 MARK2Q7KZI7 788 aaKnown RBP17.75■□□□□ 0.43
PCF11-206ENST00000533018 TMPRSS9Q7Z410 1059 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 TECPR1Q7Z6L1 1165 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 CCNYQ8ND76 341 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 LRRN4Q8WUT4 740 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 PATE1Q8WXA2 126 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 SCAMP4Q969E2 229 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 WBP1Q96G27 269 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 CDH19Q9H159 772 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 ABCG8Q9H221 673 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 SEPT10Q9P0V9 454 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 SLC17A4Q9Y2C5 497 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 SSUH2Q9Y2M2 353 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 PPIL1Q9Y3C6 166 aa17.75■□□□□ 0.43
PCF11-206ENST00000533018 PRAMEF33A0A0G2JMD5 474 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 A0A0J9YYE9 177 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 INPP4BO15327 924 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 NVLO15381 856 aaKnown RBP17.74■□□□□ 0.43
PCF11-206ENST00000533018 B4GAT1O43505 415 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 FZD6O60353 706 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 PRAMEF10O60809 474 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 ASMTLO95671 621 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 TRBC1P01850 177 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 GYPCP04921 128 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 IVLP07476 585 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 ZNF30P17039 623 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 CES1P23141 567 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 CCNCP24863 283 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 TEAD1P28347 426 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 PAFAH1B3Q15102 231 aaKnown RBP17.74■□□□□ 0.43
PCF11-206ENST00000533018 PDK2Q15119 407 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 TRIM74Q86UV6 250 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 CPNE8Q86YQ8 564 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 LPCAT1Q8NF37 534 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 FAM71BQ8TC56 605 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 SNRNP27Q8WVK2 155 aaKnown RBP17.74■□□□□ 0.43
PCF11-206ENST00000533018 CTNNBL1Q8WYA6 563 aaPredicted RBP17.74■□□□□ 0.43
PCF11-206ENST00000533018 USP7Q93009 1102 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 ZNF670Q9BS34 389 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 ZMYND15Q9H091 742 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 PLEKHM1Q9Y4G2 1056 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 PCDHB11Q9Y5F2 797 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.74■□□□□ 0.434e-11■■□□□ 11.5
PCF11-206ENST00000533018 COL6A6A6NMZ7 2263 aa17.74■□□□□ 0.43
PCF11-206ENST00000533018 PROSCO94903 275 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 ZIC2O95409 532 aaPredicted RBP17.73■□□□□ 0.43
PCF11-206ENST00000533018 TPM3P06753 285 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 KRT7P08729 469 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 H2AFZP0C0S5 128 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 LIPCP11150 499 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 MX2P20592 715 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 ETV5P41161 510 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 ARSEP51690 589 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 TMEM164Q5U3C3 297 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 ADAMTSL4Q6UY14 1074 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 H2AFVQ71UI9 128 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 SLITRK4Q8IW52 837 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 RCBTB1Q8NDN9 531 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 EXD1Q8NHP7 514 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 MAML1Q92585 1016 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 TTC9Q92623 222 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 OR2M4Q96R27 311 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 NUDT22Q9BRQ3 303 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 RIOK2Q9BVS4 552 aaKnown RBP17.73■□□□□ 0.43
PCF11-206ENST00000533018 TDRD1Q9BXT4 1180 aaKnown RBP17.73■□□□□ 0.43
PCF11-206ENST00000533018 DEF6Q9H4E7 631 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 UVRAGQ9P2Y5 699 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 DNPEPQ9ULA0 475 aa17.73■□□□□ 0.43
PCF11-206ENST00000533018 TRBV23OR9-2A0A075B6M9 112 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 CLDN7O95471 211 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 SOD1P00441 154 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms