RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CLIC5Q9NZA1 410 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 CFAP97Q9P2B7 532 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 ZFP37Q9Y6Q3 630 aaPredicted RBP15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 SMIM31A0A1B0GVY4 71 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 NTRK1P04629 796 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 CRHR2Q13324 411 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TAPT1Q6NXT6 567 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 DOK6Q6PKX4 331 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 C11orf74Q86VG3 221 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 CACUL1Q86Y37 369 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 C8orf59Q8N0T1 100 aaPredicted RBP15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TMEM199Q8N511 208 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 PPP1R16AQ96I34 528 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 SMOQ99835 787 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 MRPS23Q9Y3D9 190 aaKnown RBP15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 ABLIM1O14639 778 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 ALDH1A2O94788 518 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 TTKP33981 857 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 NR1H2P55055 460 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 WNT7BP56706 349 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 ALDH6A1Q02252 535 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 SIX1Q15475 284 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 TJAP1Q5JTD0 557 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 CPSF7Q8N684 471 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 RORBQ92753 470 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 DDX28Q9NUL7 540 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 ATAD3AQ9NVI7 634 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 EVLQ9UI08 416 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 TIMM22Q9Y584 194 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 FAM20BO75063 409 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 LAG3P18627 525 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 SP100P23497 879 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 SERPINB1P30740 379 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 KRT20P35900 424 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 PURAQ00577 322 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 PWP1Q13610 501 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 MPPE1Q53F39 396 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 GDF6Q6KF10 455 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 SVOPQ8N4V2 548 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 MAGEB10Q96LZ2 347 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 ANKRD36CQ5JPF3 1778 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 TBC1D3BA6NDS4 549 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 FAM220BPB1ANY3 271 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 HLA-DQB2P05538 268 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 OGNP20774 298 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 CLCQ05315 142 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 SPESP1Q6UW49 350 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 CD99L2Q8TCZ2 262 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 HAPLN2Q9GZV7 340 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 RAD21L1Q9H4I0 556 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 KRT84Q9NSB2 600 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 ENOPH1Q9UHY7 261 aa15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 CDV3Q9UKY7 258 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-202ENST00000532566 GLYATL1P3A0A0U1RQE8 302 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 DYTNA2CJ06 578 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 CAPN8A6NHC0 703 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 GABRDO14764 452 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 SNAP91O60641 907 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 SLC25A14O95258 325 aaPredicted RBP15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 CXCR3P49682 368 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 ACLYP53396 1101 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 EMC10Q5UCC4 262 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 IFNL1Q8IU54 200 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 UBE2E3Q969T4 207 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 YIPF2Q9BWQ6 316 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 OSBPL6Q9BZF3 934 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 CEP44Q9C0F1 390 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 SPATA31D3P0C874 917 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 CACNG1Q06432 222 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 RALGDSQ12967 914 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 POM121L1PQ3SYA9 428 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 SPATA31D4Q6ZUB0 917 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 UBR7Q8N806 425 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 C2orf15Q8WU43 125 aaKnown RBP15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 SYT11Q9BT88 431 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 ADAM7Q9H2U9 754 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 C3orf18Q9UK00 162 aa15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 POLR3HQ9Y535 204 aaPredicted RBP15.27■□□□□ 0.04
PCDHA3-202ENST00000532566 GALNT2Q10471 571 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 PLCL1Q15111 1095 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 INTS11Q5TA45 600 aaKnown RBP15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 MTSS1LQ765P7 747 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 ZBED3Q96IU2 234 aaPredicted RBP15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 UNC93B1Q9H1C4 597 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 KCNE2Q9Y6J6 123 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 MYH14Q7Z406 1995 aaKnown RBP15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 ANKDD1BA6NHY2 528 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 CXCL14O95715 111 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 CHRNGP07510 517 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 GSTM1P09488 218 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 GSTT1P30711 240 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 CTNNB1P35222 781 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 MLLT6P55198 1093 aaPredicted RBP15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 IRF9Q00978 393 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 RALGPS1Q5JS13 557 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 IGDCC3Q8IVU1 814 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 LPGAT1Q92604 370 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 FEM1CQ96JP0 617 aa15.27■□□□□ 0.03
PCDHA3-202ENST00000532566 OR52E6Q96RD3 313 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms