RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 GIMD1P0DJR0 217 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 ALPPL2P10696 532 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 PMLP29590 882 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 GPR1P46091 355 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 HK3P52790 923 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 SRP54P61011 504 aaKnown RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 PRPSAP1Q14558 356 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 SIX1Q15475 284 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 SIRPB2Q5JXA9 342 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 HENMT1Q5T8I9 393 aaKnown RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 FAXCQ5TGI0 409 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 ENPP7Q6UWV6 458 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 ADAMTSL4Q6UY14 1074 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 ARHGEF18Q6ZSZ5 1173 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 C17orf53Q8N3J3 647 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 OR56A4Q8NGH8 313 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 SCAMP4Q969E2 229 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 EID2BQ96D98 161 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 CNDP2Q96KP4 475 aaKnown RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 TMEM121Q9BTD3 319 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 DUSP23Q9BVJ7 150 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 LGR4Q9BXB1 951 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 CDH19Q9H159 772 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 TCEAL2Q9H3H9 227 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 TRABDQ9H4I3 376 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 FGF22Q9HCT0 170 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 RAD18Q9NS91 495 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 TOR4AQ9NXH8 423 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 NFKBIL1Q9UBC1 381 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 AAR2Q9Y312 384 aaKnown RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 JRKLQ9Y4A0 524 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 TDRD6O60522 2096 aaKnown RBP14.98□□□□□ -0.01
CPSF1-208ENST00000532560 GOLGA6CA6NDK9 693 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 GOLGA6BA6NDN3 693 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 TMEM202A6NGA9 273 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 TRIM38O00635 465 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 ENC1O14682 589 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 FFAR2O15552 330 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 DKK1O94907 266 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 LDOC1O95751 146 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-208ENST00000532560 GOLGA6DP0CG33 693 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 ADRA1AP35348 466 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 GDF10P55107 478 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 DCDC1P59894 354 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 P3H1Q32P28 736 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 PROX2Q3B8N5 592 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 PRRT3Q5FWE3 981 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 TMC3Q7Z5M5 1100 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 HID1Q8IV36 788 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 FSTL5Q8N475 847 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-208ENST00000532560 MAIP1Q8WWC4 291 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 OR1E3Q8WZA6 343 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 TSACCQ96A04 125 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-208ENST00000532560 PDXPQ96GD0 296 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 WDR24Q96S15 920 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 FICDQ9BVA6 458 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 RIOK2Q9BVS4 552 aaKnown RBP14.98□□□□□ -0.01
CPSF1-208ENST00000532560 FRMD8Q9BZ67 464 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-208ENST00000532560 GPR63Q9BZJ6 419 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 GOLGA6AQ9NYA3 693 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 HACD3Q9P035 362 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 SHOC2Q9UQ13 582 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 APOBEC2Q9Y235 224 aaKnown RBP14.98□□□□□ -0.01
CPSF1-208ENST00000532560 SPO11Q9Y5K1 396 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 SCN8AQ9UQD0 1980 aa14.98□□□□□ -0.01
CPSF1-208ENST00000532560 PRSS38A1L453 326 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 LMO7DNF2Z398 122 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 TPP1O14773 563 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 SIGLEC6O43699 453 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 TRIM16O95361 564 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 FGGP02679 453 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 STIP1P31948 543 aaKnown RBP14.97□□□□□ -0.01
CPSF1-208ENST00000532560 CHRNA4P43681 627 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 CCNG2Q16589 344 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 PARP6Q2NL67 630 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 KCTD16Q68DU8 428 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 DRICH1Q6PGQ1 229 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-208ENST00000532560 RANBP10Q6VN20 620 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 NYAP1Q6ZVC0 841 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 SDR16C5Q8N3Y7 309 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 TTC30BQ8N4P2 665 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 SLC25A41Q8N5S1 370 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 FAM181AQ8N9Y4 354 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 LMX1AQ8TE12 382 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 C1orf54Q8WWF1 131 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 AGAP2Q99490 1192 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 CLPBQ9H078 707 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 FAM83DQ9H4H8 585 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 NCOR2Q9Y618 2525 aa14.97□□□□□ -0.01
CPSF1-208ENST00000532560 AURKAO14965 403 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 KIF5CO60282 957 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 CEP104O60308 925 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 TNFP01375 233 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 SLC4A1P02730 911 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 CXCR5P32302 372 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 HMGCLP35914 325 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 ACADVLP49748 655 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 ELOCQ15369 112 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 ZNF569Q5MCW4 686 aa14.96□□□□□ -0.01
CPSF1-208ENST00000532560 KCTD11Q693B1 232 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms