RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 METTL2BQ6P1Q9 378 aaKnown RBP3.16□□□□□ -1.9
ATM-217ENST00000531957 ASB18Q6ZVZ8 466 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 LRRTM4Q86VH4 590 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 SPEM1Q8N4L4 309 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 PCDH20Q8N6Y1 951 aaKnown RBP3.16□□□□□ -1.9
ATM-217ENST00000531957 WDSUB1Q8N9V3 476 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 MAGEC3Q8TD91 643 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 TAS1R2Q8TE23 839 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 TAF15Q92804 592 aaKnown RBP eCLIP3.16□□□□□ -1.9
ATM-217ENST00000531957 GCC1Q96CN9 775 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 ORAI1Q96D31 301 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 GRAMD2BQ96HH9 432 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 METTL2AQ96IZ6 378 aaKnown RBP3.16□□□□□ -1.9
ATM-217ENST00000531957 SYT17Q9BSW7 474 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 POLR3CQ9BUI4 534 aaPredicted RBP3.16□□□□□ -1.9
ATM-217ENST00000531957 GPR63Q9BZJ6 419 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 PLEKHA4Q9H4M7 779 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 VEZTQ9HBM0 779 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 HCN3Q9P1Z3 774 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 LILRA5A6NI73 299 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 TTC36A6NLP5 189 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 ERI2A8K979 691 aaKnown RBP3.15□□□□□ -1.91
ATM-217ENST00000531957 PMS2P5A8MQ11 134 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 IFRD1O00458 451 aaPredicted RBP3.15□□□□□ -1.91
ATM-217ENST00000531957 TNPO2O14787 897 aaKnown RBP3.15□□□□□ -1.91
ATM-217ENST00000531957 LDLRAD4O15165 306 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 WDR1O75083 606 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 EGFP01133 1207 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 NR1D1P20393 614 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 VEGFCP49767 419 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 TAF6P49848 677 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 ERVK11-1P61568 191 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 TRPC3Q13507 836 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 GTF2H2Q13888 395 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 GPR68Q15743 365 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 COL28A1Q2UY09 1125 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 SLC9B1Q4ZJI4 515 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 GGNBP1Q5YKI7 109 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 TRNP1Q6NT89 227 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 GTF2H2CQ6P1K8 395 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 ARHGAP11AQ6P4F7 1023 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 ZNF524Q96C55 264 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 RHBDF1Q96CC6 855 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 LRRC1Q9BTT6 524 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 EGLN1Q9GZT9 426 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 SEBOXQ9HB31 216 aaPredicted RBP3.15□□□□□ -1.91
ATM-217ENST00000531957 HCFC1R1Q9NWW0 138 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 TMEM160Q9NX00 188 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 SLC25A10Q9UBX3 287 aaPredicted RBP3.15□□□□□ -1.91
ATM-217ENST00000531957 PADI3Q9ULW8 664 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 A4GNTQ9UNA3 340 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 ERVK-11Q9UQG0 969 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 SCINQ9Y6U3 715 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 SNED1Q8TER0 1413 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 TAF1P21675 1872 aa3.15□□□□□ -1.91
ATM-217ENST00000531957 GOLGA6L9A6NEM1 432 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 GAGE10A6NGK3 116 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 VCYO14598 125 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 SEC31AO94979 1220 aaKnown RBP3.14□□□□□ -1.91
ATM-217ENST00000531957 HNRNPA1P09651 372 aaKnown RBP eCLIP3.14□□□□□ -1.91
ATM-217ENST00000531957 ZNF883P0CG24 379 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 DDX5P17844 614 aaKnown RBP3.14□□□□□ -1.91
ATM-217ENST00000531957 ALDH4A1P30038 563 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 PAFAH1B1P43034 410 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 MAPK9P45984 424 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 CCT5P48643 541 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 GNAQP50148 359 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 NR0B1P51843 470 aaKnown RBP3.14□□□□□ -1.91
ATM-217ENST00000531957 RAD23BP54727 409 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 GALNT2Q10471 571 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 ZNF234Q14588 700 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 FCN2Q15485 313 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 KRT24Q2M2I5 525 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 PLEKHA7Q6IQ23 1121 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 FAM171BQ6P995 826 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 DGLUCYQ7Z3D6 616 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 ZNF354CQ86Y25 554 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 KRTAP7-1Q8IUC3 87 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 CCDC13Q8IYE1 715 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 KLHDC9Q8NEP7 349 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 ACVR1CQ8NER5 493 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 FAM76AQ8TAV0 307 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 SLC38A5Q8WUX1 472 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 PIGTQ969N2 578 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 SLC41A2Q96JW4 573 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 MAELQ96JY0 434 aaKnown RBP3.14□□□□□ -1.91
ATM-217ENST00000531957 ZNF354BQ96LW1 612 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 F2RL3Q96RI0 385 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 LITAFQ99732 161 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 FAM110AQ9BQ89 295 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 H2AFJQ9BTM1 129 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 RBM4Q9BWF3 364 aaKnown RBP3.14□□□□□ -1.91
ATM-217ENST00000531957 RRN3Q9NYV6 651 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.14□□□□□ -1.91
ATM-217ENST00000531957 DLGAP4Q9Y2H0 992 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 DGKBQ9Y6T7 804 aa3.14□□□□□ -1.91
ATM-217ENST00000531957 A0A1B0GU03 582 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 POLBP06746 335 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 PATE4P0C8F1 98 aa3.13□□□□□ -1.91
ATM-217ENST00000531957 HSD3B1P14060 373 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms