RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CHCHD4Q8N4Q1 142 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 MSANTD4Q8NCY6 345 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 RASSF8Q8NHQ8 419 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 ATOH1Q92858 354 aaPredicted RBP4.49□□□□□ -1.69
USP47-211ENST00000531513 ZNF622Q969S3 477 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP47-211ENST00000531513 SIPA1Q96FS4 1042 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 CAMK1GQ96NX5 476 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 GBP5Q96PP8 586 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 GPATCH1Q9BRR8 931 aaKnown RBP4.49□□□□□ -1.69
USP47-211ENST00000531513 HGH1Q9BTY7 390 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 TKTL2Q9H0I9 626 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 ST6GALNAC4Q9H4F1 302 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 WDR6Q9NNW5 1121 aaKnown RBP4.49□□□□□ -1.69
USP47-211ENST00000531513 BPIFA1Q9NP55 256 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 ZBTB40Q9NUA8 1239 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 AMACRQ9UHK6 382 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 IPO11Q9UI26 975 aaKnown RBP4.49□□□□□ -1.69
USP47-211ENST00000531513 OSGIN1Q9UJX0 560 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 PLAGL1Q9UM63 463 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 HS3ST3B1Q9Y662 390 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 CEPT1Q9Y6K0 416 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 MAU2Q9Y6X3 613 aa4.49□□□□□ -1.69
USP47-211ENST00000531513 LOC102723996A0A087X1L8 192 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 DDTLA6NHG4 134 aaPredicted RBP4.48□□□□□ -1.69
USP47-211ENST00000531513 CYSRT1A8MQ03 144 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 CHL1O00533 1208 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 PLAUP00749 431 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 TGFB3P10600 412 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 CTSAP10619 480 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 ACTN1P12814 892 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 CTPS1P17812 591 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 SRD5A1P18405 259 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 TFEBP19484 476 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 SUOXP51687 545 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 RPS13P62277 151 aaKnown RBP4.48□□□□□ -1.69
USP47-211ENST00000531513 PKP1Q13835 747 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 KCNC3Q14003 757 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 TCTN1Q2MV58 587 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 ZNF805Q5CZA5 627 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 KRBOX4Q5JUW0 171 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 C6orf141Q5SZD1 244 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 DAB2IPQ5VWQ8 1189 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 ZNF549Q6P9A3 640 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 AAGABQ6PD74 315 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 CYB5R4Q7L1T6 521 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 AACSQ86V21 672 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 ZSCAN30Q86W11 494 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 METTL23Q86XA0 190 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 PELI3Q8N2H9 469 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 DEPDC1BQ8WUY9 529 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 ZC3HAV1LQ96H79 300 aaKnown RBP4.48□□□□□ -1.69
USP47-211ENST00000531513 ZFYVE19Q96K21 471 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 FER1L6-AS2Q96M78 137 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 CFAP57Q96MR6 1250 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 CTAGE1Q96RT6 745 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 FNBP1Q96RU3 617 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 MXRA8Q9BRK3 442 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 NAA11Q9BSU3 229 aaPredicted RBP4.48□□□□□ -1.69
USP47-211ENST00000531513 C2orf40Q9H1Z8 148 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 DENND2DQ9H6A0 471 aaPredicted RBP4.48□□□□□ -1.69
USP47-211ENST00000531513 MAGEE1Q9HCI5 957 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 PFDN4Q9NQP4 134 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 GDE1Q9NZC3 331 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 TUBE1Q9UJT0 475 aa4.48□□□□□ -1.69
USP47-211ENST00000531513 A0A096LPK6 155 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 TRBV5-7A0A0A0MS05 114 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 GPR75-ASB3A0A0A6YYF3 556 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 A0A1W2PR77 199 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 C17orf102A2RUQ5 167 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 TRIM64A6NGJ6 449 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 TRIM64BA6NI03 449 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 A6NL46 340 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 HSPB2A8KAH6 182 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 SMTNL1A8MU46 457 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 INPPL1O15357 1258 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 GPC4O75487 556 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 DAB1O75553 588 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 CD63P08962 238 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 ATP6V1B1P15313 513 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 AGAP20933 346 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 PTAFRP25105 342 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 GPR12P47775 334 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 CCR3P51677 355 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 YPEL5P62699 121 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 PPP2R5CQ13362 524 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 IL11RAQ14626 422 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 PGM5Q15124 567 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 HSPB2Q16082 182 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 CDONQ4KMG0 1287 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 SGO1Q5FBB7 561 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 CST9LP1Q5W188 147 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 CES5AQ6NT32 575 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 SHQ1Q6PI26 577 aaKnown RBP4.47□□□□□ -1.69
USP47-211ENST00000531513 LCTLQ6UWM7 567 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 NOXA1Q86UR1 476 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 HAPLN4Q86UW8 402 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 MCEMP1Q8IX19 187 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 MMP21Q8N119 569 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 MCUQ8NE86 351 aa4.47□□□□□ -1.69
USP47-211ENST00000531513 MCPH1Q8NEM0 835 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms