RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 SNX14Q9Y5W7 946 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 CACNG2Q9Y698 323 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 TCHHQ07283 1943 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 MRC2Q9UBG0 1479 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ARHGEF11O15085 1522 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 ARHGEF12Q9NZN5 1544 aa5.69□□□□□ -1.5
CD44-231ENST00000531110 BCORL1Q5H9F3 1711 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 HECW2Q9P2P5 1572 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 NPHP4O75161 1426 aaPredicted RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 PDS5BQ9NTI5 1447 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 FAM237AA0A1B0GTK4 181 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 FAM172BPA6NC97 362 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 POM121BA6NF01 834 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 TARM1B6A8C7 271 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 H7C4K7 107 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 O00370 1275 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 POLR2DO15514 142 aaKnown RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 KCNQ3O43525 872 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 NCK2O43639 380 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 PFKFB2O60825 505 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 SRGAP2O75044 1071 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ATP9AO75110 1047 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 NIPSNAP2O75323 286 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 PIAS2O75928 621 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 EPN2O95208 641 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 NPPAP01160 153 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 OPN1MWP04001 364 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 KRT7P08729 469 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 OPN1MW2P0DN77 364 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 OPN1MW3P0DN78 364 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 JUPP14923 745 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 NDUFB7P17568 137 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ITGB6P18564 788 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ADORA2AP29274 412 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 CIITAP33076 1130 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 KRT2P35908 639 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 MAGEA11P43364 429 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 GDI2P50395 445 aaKnown RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 TPTEP56180 551 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 P2RX3P56373 397 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 RAB14P61106 215 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 XIAPP98170 497 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 PPP2R2BQ00005 443 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 SP2Q02086 613 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ACY1Q03154 408 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 CKAP4Q07065 602 aaKnown RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 AIMP1Q12904 312 aaKnown RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 GIT2Q14161 759 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 KCNAB1Q14722 419 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 C5orf22Q49AR2 442 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 TCTE1Q5JU00 501 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 TCHHL1Q5QJ38 904 aaPredicted RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 INTS11Q5TA45 600 aaKnown RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 CACHD1Q5VU97 1274 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 LRIG3Q6UXM1 1119 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 LINC00299Q6ZSB3 139 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 HDDC2Q7Z4H3 204 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 GPR142Q7Z601 462 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 DNAAF5Q86Y56 855 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 CPXCR1Q8N123 301 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 TCP11L2Q8N4U5 519 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ZNF565Q8N9K5 539 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 SLC4A11Q8NBS3 891 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ATP6V1E2Q96A05 226 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ZG16BQ96DA0 208 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 C19orf60Q96EN9 201 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 FAM227BQ96M60 508 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 PANX2Q96RD6 677 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 YME1L1Q96TA2 773 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 CCDC106Q9BWC9 280 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 VN1R3Q9BXE9 311 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 FSD1LQ9BXM9 530 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 EDEM3Q9BZQ6 932 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 NT5C3AQ9H0P0 336 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 RAB17Q9H0T7 212 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 DPEP3Q9H4B8 488 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 PRDM13Q9H4Q3 707 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 CCDC134Q9H6E4 229 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 DCLRE1BQ9H816 532 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 KCNK13Q9HB14 408 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 GBA2Q9HCG7 927 aaPredicted RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 PLCB1Q9NQ66 1216 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 DUSP22Q9NRW4 184 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 DLL3Q9NYJ7 618 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ARPP21Q9UBL0 812 aaPredicted RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 CD300AQ9UGN4 299 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 ATP6V1HQ9UI12 483 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 KLF2Q9Y5W3 355 aaPredicted RBP5.68□□□□□ -1.5
CD44-231ENST00000531110 USH1CQ9Y6N9 552 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 AFF2P51816 1311 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 WDR17Q8IZU2 1322 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 WDR62O43379 1518 aa5.68□□□□□ -1.5
CD44-231ENST00000531110 INO80Q9ULG1 1556 aaPredicted RBP5.67□□□□□ -1.5
CD44-231ENST00000531110 PIK3C2GO75747 1445 aa5.67□□□□□ -1.5
CD44-231ENST00000531110 CROCC2H7BZ55 1655 aa5.67□□□□□ -1.5
CD44-231ENST00000531110 A0A0G2JPF8 293 aa5.67□□□□□ -1.5
CD44-231ENST00000531110 FUOMA2VDF0 154 aa5.67□□□□□ -1.5
CD44-231ENST00000531110 VWA3AA6NCI4 1184 aa5.67□□□□□ -1.5
CD44-231ENST00000531110 HNRNPCL3B7ZW38 293 aa5.67□□□□□ -1.5
CD44-231ENST00000531110 ZNF701M0R085 212 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms