RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 RSL1D1O76021 490 aaKnown RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 BAG2O95816 211 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 ATP6V1B1P15313 513 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 PRLRP16471 622 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 HOXC9P31274 260 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 TFF2Q03403 129 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 PPP2R5CQ13362 524 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 SNAPC1Q16533 368 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 PNLIPRP3Q17RR3 467 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 MEX3CQ5U5Q3 659 aaKnown RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 FCRLBQ6BAA4 426 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 DHRS7BQ6IAN0 325 aaPredicted RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 HEPHL1Q6MZM0 1159 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 ANKRD54Q6NXT1 300 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 MTSS1LQ765P7 747 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 ERN2Q76MJ5 926 aaKnown RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 CCDC91Q7Z6B0 441 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 SDCCAG8Q86SQ7 713 aaPredicted RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 IQCHQ86VS3 1027 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 SCCPDHQ8NBX0 429 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 MSI2Q96DH6 328 aaKnown RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 ZNF830Q96NB3 372 aaPredicted RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 WDR83Q9BRX9 315 aaKnown RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 SPATC1LQ9H0A9 340 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 SLCO5A1Q9H2Y9 848 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 GOLPH3LQ9H4A5 285 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 DNAJC18Q9H819 358 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 EPB41L5Q9HCM4 733 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 MKKSQ9NPJ1 570 aaPredicted RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 MBNL1Q9NR56 388 aaKnown RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 OLAHQ9NV23 265 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 MTRRQ9UBK8 725 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 STON1Q9Y6Q2 735 aa6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.46□□□□□ -1.38
CAPRIN1-208ENST00000530008 TRBV5-3A0A0A0MS03 114 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 TRAV34A0A0B4J273 112 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 STMND1H3BQB6 276 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 SMAD9O15198 467 aaKnown RBP6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 NDUFB4O95168 129 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 TRUB2O95900 331 aaKnown RBP6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 ICAM1P05362 532 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 KRT4P19013 534 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 CDH12P55289 794 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 SREBF2Q12772 1141 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 E2F5Q15329 346 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 SMTNL2Q2TAL5 461 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 CBWD6Q4V339 395 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 CBWD3Q5JTY5 395 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 ARMC4Q5T2S8 1044 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 SIGIRRQ6IA17 410 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 ADIPOR2Q86V24 386 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 CCDC170Q8IYT3 715 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 CEP57L1Q8IYX8 460 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 NUP93Q8N1F7 819 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 CARNMT1Q8N4J0 409 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 RBM15BQ8NDT2 890 aaKnown RBP6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 OR10S1Q8NGN2 331 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 CFAP61Q8NHU2 1237 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 ERGIC1Q969X5 290 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 MSTO1Q9BUK6 570 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 KLHL31Q9H511 634 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 THSD1Q9NS62 852 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 SEMA4GQ9NTN9 838 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 DNAJB9Q9UBS3 223 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 HACL1Q9UJ83 578 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 POMT1Q9Y6A1 747 aa6.45□□□□□ -1.38
CAPRIN1-208ENST00000530008 EDDM13A0A1B0GTR0 161 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 CPED1A4D0V7 1026 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 ZWINTO95229 277 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 GCP02774 474 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 CYC1P08574 325 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 MYF6P23409 242 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 AVPR1AP37288 418 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 PPP3CCP48454 512 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 SPOCK1Q08629 439 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 MMEL1Q495T6 779 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 PIK3CD-AS1Q5SR53 167 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 C6orf10Q5SRN2 563 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 MPP7Q5T2T1 576 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 C6orf163Q5TEZ5 329 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 ASPHD1Q5U4P2 390 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 HAUS6Q7Z4H7 955 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 LDB1Q86U70 411 aaPredicted RBP6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 ARHGEF25Q86VW2 580 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 GPSM1Q86YR5 675 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 MB21D2Q8IYB1 491 aaPredicted RBP6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 SPATA6LQ8N4H0 392 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 CAMKVQ8NCB2 501 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 AGBL3Q8NEM8 1001 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 PRRX2Q99811 253 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 ZNF747Q9BV97 191 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 KCNK15Q9H427 330 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 ESRP2Q9H6T0 727 aaKnown RBP6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 COPS7BQ9H9Q2 264 aaPredicted RBP6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 KLHL13Q9P2N7 655 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 WDR17Q8IZU2 1322 aa6.44□□□□□ -1.38
CAPRIN1-208ENST00000530008 KANSL1LA0AUZ9 987 aa6.43□□□□□ -1.38
CAPRIN1-208ENST00000530008 ARHGEF37A1IGU5 675 aa6.43□□□□□ -1.38
CAPRIN1-208ENST00000530008 WIPF3A6NGB9 483 aa6.43□□□□□ -1.38
CAPRIN1-208ENST00000530008 MAP2K7O14733 419 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms