RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZBED8Q8IZ13 594 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 RGL4Q8IZJ4 473 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 SDR16C5Q8N3Y7 309 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 TAB3Q8N5C8 712 aaPredicted RBP7.91□□□□□ -1.14
SSBP3-211ENST00000528787 MFSD2AQ8NA29 543 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 GLIS1Q8NBF1 620 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
SSBP3-211ENST00000528787 GSDMBQ8TAX9 411 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 BTN2A2Q8WVV5 523 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 DNASE2BQ8WZ79 361 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 SNX19Q92543 992 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 DCUN1D1Q96GG9 259 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 SERAC1Q96JX3 654 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 COQ10AQ96MF6 247 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 VPS35Q96QK1 796 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 LRFN3Q9BTN0 628 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 WRAP53Q9BUR4 548 aaKnown RBP7.91□□□□□ -1.14
SSBP3-211ENST00000528787 SPATA16Q9BXB7 569 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 EPC1Q9H2F5 836 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 WDR26Q9H7D7 661 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 SMOXQ9NWM0 555 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 IL17CQ9P0M4 197 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 COMMD10Q9Y6G5 202 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 IKBKGQ9Y6K9 419 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 RPS6KL1Q9Y6S9 549 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 ZNF106Q9H2Y7 1883 aaKnown RBP7.91□□□□□ -1.14
SSBP3-211ENST00000528787 NUMA1Q14980 2115 aa7.91□□□□□ -1.14
SSBP3-211ENST00000528787 EML5Q05BV3 1969 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 PLXNA2O75051 1894 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 FAM86C2PA6NEL3 165 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 PRR23AA6NEV1 266 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 IGLON5A6NGN9 336 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 H3BM21 787 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 GOLGA8MH3BSY2 632 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 TNFRSF10CO14798 259 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 KPNA5O15131 536 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 BCAT2O15382 392 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 LDB2O43679 373 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 VEGFDO43915 354 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 MMP20O60882 483 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 SRP72O76094 671 aaKnown RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 TMEM63AO94886 807 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 PRAMEF1O95521 474 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 PAK4O96013 591 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 IVLP07476 585 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 MGAT1P26572 445 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 CD38P28907 300 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 CHRNA4P43681 627 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 DHPSP49366 369 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 ARRB1P49407 418 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 ZNF140P52738 457 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 TAS2R38P59533 333 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 PLOD1Q02809 727 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 ACVR1Q04771 509 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 RALGDSQ12967 914 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 ITIH4Q14624 930 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 DUOXA1Q1HG43 343 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 PLK5Q496M5 336 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 DENND2CQ68D51 928 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 RAET1GQ6H3X3 334 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 KYAT3Q6YP21 454 aaKnown RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 PRR23BQ6ZRT6 265 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 TECPR1Q7Z6L1 1165 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 CAND1Q86VP6 1230 aaKnown RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 OR4K2Q8NGD2 314 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 OR6P1Q8NGX9 317 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 OR4L1Q8NH43 312 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 FBXO25Q8TCJ0 367 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 ZNF398Q8TD17 642 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 BIRC7Q96CA5 298 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 KLHDC7BQ96G42 594 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 HSPA12BQ96MM6 686 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 APOL2Q9BQE5 337 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 GORASP1Q9BQQ3 440 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 CCDC68Q9H2F9 335 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 SAYSD1Q9NPB0 183 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 AASDHPPTQ9NRN7 309 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 EVA1BQ9NVM1 165 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 INTS10Q9NVR2 710 aaKnown RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 CRLS1Q9UJA2 301 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 CORO1CQ9ULV4 474 aaPredicted RBP7.9□□□□□ -1.14
SSBP3-211ENST00000528787 TEX264Q9Y6I9 313 aa7.9□□□□□ -1.14
SSBP3-211ENST00000528787 ZNF318Q5VUA4 2279 aa7.9□□□□□ -1.15
SSBP3-211ENST00000528787 LRRK1Q38SD2 2015 aa7.9□□□□□ -1.15
SSBP3-211ENST00000528787 VILLO15195 856 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 GJB3O75712 270 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 AP2A2O94973 939 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 SLC25A14O95258 325 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 SLC4A1P02730 911 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 MYCLP1P12525 358 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 ZNF7P17097 686 aaPredicted RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 TPH1P17752 444 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 OGNP20774 298 aaKnown RBP7.89□□□□□ -1.15
SSBP3-211ENST00000528787 LHCGRP22888 699 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 MC4RP32245 332 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 TRIM23P36406 574 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 NSG1P42857 185 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 MAGEA4P43358 317 aa7.89□□□□□ -1.15
SSBP3-211ENST00000528787 MAPK9P45984 424 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms