RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 RBM41Q96IZ5 413 aaKnown RBP9.58□□□□□ -0.88
CHD7-208ENST00000528280 HIC2Q96JB3 615 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 ZNF578Q96N58 590 aaPredicted RBP9.58□□□□□ -0.88
CHD7-208ENST00000528280 VAT1Q99536 393 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 LGMNQ99538 433 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 TDRD1Q9BXT4 1180 aaKnown RBP9.58□□□□□ -0.88
CHD7-208ENST00000528280 ABCG8Q9H221 673 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 DPEP2Q9H4A9 486 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 MAGEE1Q9HCI5 957 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 GOLGA6AQ9NYA3 693 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 PKD2L2Q9NZM6 624 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 APPL1Q9UKG1 709 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 EFR3BQ9Y2G0 817 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 U3KQA8 63 aa9.58□□□□□ -0.88
CHD7-208ENST00000528280 ANKRD36A6QL64 1941 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 BTNL10A8MVZ5 291 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 HACD1B0YJ81 288 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 KCNK1O00180 336 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 NUDT21O43809 227 aaKnown RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 CST8O60676 142 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 USP12O75317 370 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CSO75390 466 aaKnown RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 DXOO77932 396 aaKnown RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 NDUFA10O95299 355 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 MAP3K6O95382 1288 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 PRLP01236 227 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 EPOP01588 193 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 HLA-DQB2P05538 268 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CEACAM5P06731 702 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 TNNT1P13805 278 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 LHCGRP22888 699 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 RBMS1P29558 406 aaKnown RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 CD86P42081 329 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CDKN2BP42772 138 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 STC1P52823 247 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 NAP1L1P55209 391 aaKnown RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 ERVPABLB-1P60509 514 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CDK3Q00526 305 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 NIPAL4Q0D2K0 466 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 XRCC4Q13426 336 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 SPIDRQ14159 915 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CLPPQ16740 277 aaPredicted RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 C11orf63Q6NUN7 778 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 IGF2-ASQ6U949 168 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 SPOCD1Q6ZMY3 1216 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 DAAM2Q86T65 1068 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 MARCH9Q86YJ5 346 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CPNE8Q86YQ8 564 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CNTD1Q8N815 330 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 GPR156Q8NFN8 814 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 GPBAR1Q8TDU6 330 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 SLC39A7Q92504 469 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 TMEM159Q96B96 161 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CCDC97Q96F63 343 aaPredicted RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 IMP4Q96G21 291 aaKnown RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 SCARF2Q96GP6 870 aaPredicted RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 TMEM74Q96NL1 305 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 AGAP3Q96P47 875 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 OLFM3Q96PB7 478 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CCDC3Q9BQI4 270 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 LGR4Q9BXB1 951 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 FRMD8Q9BZ67 464 aaPredicted RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 STRADBQ9C0K7 418 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 FAM83DQ9H4H8 585 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 RMI1Q9H9A7 625 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 POLR1BQ9H9Y6 1135 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 CARS2Q9HA77 564 aaKnown RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHD7-208ENST00000528280 IMPACTQ9P2X3 320 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 TRHDEQ9UKU6 1024 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 PNMA8BQ9ULN7 279 aaPredicted RBP9.57□□□□□ -0.88
CHD7-208ENST00000528280 SLC17A4Q9Y2C5 497 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 RAXQ9Y2V3 346 aa9.57□□□□□ -0.88
CHD7-208ENST00000528280 SPTA1P02549 2419 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 PIEZO2Q9H5I5 2752 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 C1orf232A0A0U1RR37 186 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 CCDC66A2RUB6 948 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 GOLGA6L6A8MZA4 724 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 CLDN7O95471 211 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 MYF5P13349 255 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 EIF2S3P41091 472 aaKnown RBP9.56□□□□□ -0.88
CHD7-208ENST00000528280 SPINT3P49223 89 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 SKOR1P84550 965 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 CDK18Q07002 472 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 EIF3IQ13347 325 aaKnown RBP9.56□□□□□ -0.88
CHD7-208ENST00000528280 BIRC2Q13490 618 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 LRP8Q14114 963 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 PPP2R5EQ16537 467 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 QPCTQ16769 361 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 C14orf28Q4W4Y0 310 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 ZDHHC20Q5W0Z9 365 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 PDPK2PQ6A1A2 396 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 MFSD7Q6UXD7 560 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 TSPAN33Q86UF1 283 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 CCDC50Q8IVM0 306 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 ARL14Q8N4G2 192 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.56□□□□□ -0.88
CHD7-208ENST00000528280 LPCAT1Q8NF37 534 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 WDR36Q8NI36 951 aaKnown RBP9.56□□□□□ -0.88
CHD7-208ENST00000528280 SNIP1Q8TAD8 396 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms