RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SLC38A3Q99624 504 aa25.83■■□□□ 1.73
PVT1-219ENST00000523427 TRIM7Q9C029 511 aa25.83■■□□□ 1.73
PVT1-219ENST00000523427 PHTF1Q9UMS5 762 aa25.83■■□□□ 1.73
PVT1-219ENST00000523427 SLC17A4Q9Y2C5 497 aa25.83■■□□□ 1.73
PVT1-219ENST00000523427 BSNQ9UPA5 3926 aa25.82■■□□□ 1.72
PVT1-219ENST00000523427 EIF3CLB5ME19 914 aaKnown RBP25.82■■□□□ 1.72
PVT1-219ENST00000523427 DUX1O43812 170 aa25.82■■□□□ 1.72
PVT1-219ENST00000523427 SOCS5O75159 536 aa25.82■■□□□ 1.72
PVT1-219ENST00000523427 IVLP07476 585 aa25.82■■□□□ 1.72
PVT1-219ENST00000523427 PEX6Q13608 980 aa25.82■■□□□ 1.72
PVT1-219ENST00000523427 UBAP2LQ14157 1087 aaKnown RBP25.82■■□□□ 1.72
PVT1-219ENST00000523427 TMEM71Q6P5X7 295 aa25.82■■□□□ 1.72
PVT1-219ENST00000523427 SMIM14Q96QK8 99 aa25.82■■□□□ 1.72
PVT1-219ENST00000523427 EIF3CQ99613 913 aaKnown RBP25.82■■□□□ 1.72
PVT1-219ENST00000523427 GPN2Q9H9Y4 310 aaPredicted RBP25.82■■□□□ 1.72
PVT1-219ENST00000523427 KCTD5Q9NXV2 234 aa25.82■■□□□ 1.72
PVT1-219ENST00000523427 A0A1W2PQ67 120 aa25.81■■□□□ 1.72
PVT1-219ENST00000523427 LGALS16A8MUM7 142 aa25.81■■□□□ 1.72
PVT1-219ENST00000523427 NFKBIAP25963 317 aa25.81■■□□□ 1.72
PVT1-219ENST00000523427 ANKRD20A12PQ8NF67 263 aa25.81■■□□□ 1.72
PVT1-219ENST00000523427 RNF31Q96EP0 1072 aa25.81■■□□□ 1.72
PVT1-219ENST00000523427 ZNF599Q96NL3 588 aa25.81■■□□□ 1.72
PVT1-219ENST00000523427 NUDCD1Q96RS6 583 aa25.81■■□□□ 1.72
PVT1-219ENST00000523427 LRRK2Q5S007 2527 aa25.81■■□□□ 1.72
PVT1-219ENST00000523427 ASMTLO95671 621 aa25.8■■□□□ 1.72
PVT1-219ENST00000523427 FERP16591 822 aa25.8■■□□□ 1.72
PVT1-219ENST00000523427 AMPD1P23109 780 aa25.8■■□□□ 1.72
PVT1-219ENST00000523427 MAPK9P45984 424 aa25.8■■□□□ 1.72
PVT1-219ENST00000523427 CBARPQ8N350 705 aaPredicted RBP25.8■■□□□ 1.72
PVT1-219ENST00000523427 OR10G6Q8NH81 332 aa25.8■■□□□ 1.72
PVT1-219ENST00000523427 SLC37A2Q8TED4 501 aa25.8■■□□□ 1.72
PVT1-219ENST00000523427 KIAA1143Q96AT1 154 aaPredicted RBP25.8■■□□□ 1.72
PVT1-219ENST00000523427 AP2M1Q96CW1 435 aa25.8■■□□□ 1.72
PVT1-219ENST00000523427 B4E171 279 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 INPP4BO15327 924 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 MAP3K6O95382 1288 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 CR2P20023 1033 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 TSPAN7P41732 249 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 RAB15P59190 212 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 NFATC2Q13469 925 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 DPYSQ14117 519 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 ARMC12Q5T9G4 340 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 CYP4V2Q6ZWL3 525 aaPredicted RBP25.79■■□□□ 1.72
PVT1-219ENST00000523427 USP45Q70EL2 814 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 KDELC2Q7Z4H8 507 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 NLGN4XQ8N0W4 816 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 BBS5Q8N3I7 341 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.79■■□□□ 1.72
PVT1-219ENST00000523427 LZTR1Q8N653 840 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 NLGN4YQ8NFZ3 816 aaPredicted RBP25.79■■□□□ 1.72
PVT1-219ENST00000523427 C9orf43Q8TAL5 461 aaPredicted RBP25.79■■□□□ 1.72
PVT1-219ENST00000523427 SCAMP4Q969E2 229 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 SCRN2Q96FV2 425 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 CATSPER2Q96P56 530 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 DPYSL5Q9BPU6 564 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 ABCG8Q9H221 673 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 ZWILCHQ9H900 591 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 ETNK2Q9NVF9 386 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 KLHL3Q9UH77 587 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 PILRAQ9UKJ1 303 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 PRKAB1Q9Y478 270 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 GTF3C3Q9Y5Q9 886 aa25.79■■□□□ 1.72
PVT1-219ENST00000523427 LOC101059948A0A1B0GTJ6 334 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 H3BRJ5 948 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 PSMD11O00231 422 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 PGLSO95336 258 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 EML2O95834 649 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 CDK11BP21127 795 aaKnown RBP25.78■■□□□ 1.72
PVT1-219ENST00000523427 HSPA9P38646 679 aaKnown RBP25.78■■□□□ 1.72
PVT1-219ENST00000523427 GPLD1P80108 840 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 SQSTM1Q13501 440 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 SMTNL2Q2TAL5 461 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 DEFB109BQ30KR1 87 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 PLEKHA7Q6IQ23 1121 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 C16orf46Q6P387 395 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 TECPR1Q7Z6L1 1165 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 GALNT13Q8IUC8 556 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 NCSTNQ92542 709 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 RTP4Q96DX8 246 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 SLC45A3Q96JT2 553 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 AGAP2Q99490 1192 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 ZNHIT2Q9UHR6 403 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 TUBD1Q9UJT1 453 aa25.78■■□□□ 1.72
PVT1-219ENST00000523427 TMEM191CA6NGB0 347 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 PEX11BO96011 259 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 CCDC172P0C7W6 258 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 CASRP41180 1078 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 HCAR3P49019 387 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 ITKQ08881 620 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 PYCR3Q53H96 274 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 LRRC66Q68CR7 880 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 TMCO3Q6UWJ1 677 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 BMPERQ8N8U9 685 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 NSMCE1Q8WV22 266 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 SPOCK2Q92563 424 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 HSPH1Q92598 858 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 MGME1Q9BQP7 344 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 APMAPQ9HDC9 416 aa25.77■■□□□ 1.72
PVT1-219ENST00000523427 LIMA1Q9UHB6 759 aaKnown RBP25.77■■□□□ 1.72
PVT1-219ENST00000523427 CAPN5O15484 640 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms