RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 MAP9Q49MG5 647 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 ARMC12Q5T9G4 340 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 NKAIN2Q5VXU1 208 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 DOK6Q6PKX4 331 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 CPNE8Q86YQ8 564 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 ATPAF2Q8N5M1 289 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 NIPA2Q8N8Q9 360 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 TEKT4Q8WW24 435 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 EXTL1Q92935 676 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 SCAMP4Q969E2 229 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 PMEPA1Q969W9 287 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 AGAP2Q99490 1192 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 ABCG8Q9H221 673 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 KCTD5Q9NXV2 234 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 GOLGA6AQ9NYA3 693 aa20.22■□□□□ 0.83
PABPC1-217ENST00000521067 GOLGA6L22H0YM25 854 aa20.21■□□□□ 0.83
PABPC1-217ENST00000521067 IVLP07476 585 aa20.21■□□□□ 0.83
PABPC1-217ENST00000521067 ATP13A4Q4VNC1 1196 aa20.21■□□□□ 0.83
PABPC1-217ENST00000521067 RALGPS1Q5JS13 557 aa20.21■□□□□ 0.83
PABPC1-217ENST00000521067 TRIM74Q86UV6 250 aa20.21■□□□□ 0.83
PABPC1-217ENST00000521067 FAM71BQ8TC56 605 aa20.21■□□□□ 0.83
PABPC1-217ENST00000521067 SEMA3CQ99985 751 aa20.21■□□□□ 0.83
PABPC1-217ENST00000521067 FGF3P11487 239 aaPredicted RBP20.2■□□□□ 0.82
PABPC1-217ENST00000521067 GPR1P46091 355 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 ZNF165P49910 485 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 ARSEP51690 589 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 CYP4F2P78329 520 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 FIGNQ5HY92 759 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 LRRC66Q68CR7 880 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 USP45Q70EL2 814 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 BBS5Q8N3I7 341 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 LRRN4Q8WUT4 740 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 JPH3Q8WXH2 748 aaPredicted RBP20.2■□□□□ 0.82
PABPC1-217ENST00000521067 TMEM9Q9P0T7 183 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 ANAPC7Q9UJX3 599 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 PCDHGA4Q9Y5G9 962 aa20.2■□□□□ 0.82
PABPC1-217ENST00000521067 PCYT1BQ9Y5K3 369 aaPredicted RBP20.2■□□□□ 0.82
PABPC1-217ENST00000521067 MAP3K6O95382 1288 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 PRLP01236 227 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 CYP1A2P05177 515 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 ITGB6P18564 788 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 MPSTP25325 297 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 GPR3P46089 330 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 PYCR3Q53H96 274 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 MANEAQ5SRI9 462 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 ADAMTSL4Q6UY14 1074 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.19■□□□□ 0.82
PABPC1-217ENST00000521067 NSMCE1Q8WV22 266 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 HTR3CQ8WXA8 447 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 AP2M1Q96CW1 435 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 CCDC74BQ96LY2 380 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 NUP85Q9BW27 656 aa20.19■□□□□ 0.82
PABPC1-217ENST00000521067 TRBV23OR9-2A0A075B6M9 112 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 IGHV1OR21-1A0A087WYE8 117 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 A0A087X0T9 212 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 A0A0J9YYE9 177 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.18■□□□□ 0.82
PABPC1-217ENST00000521067 MFSD11O43934 449 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 EML2O95834 649 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 TRBC1P01850 177 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 FAM228BP0C875 321 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 NFKBIAP25963 317 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 CSF2RBP32927 897 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 SERPINB6P35237 376 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 PBX1P40424 430 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 ACTR1BP42025 376 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 LIMK2P53671 638 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 ACTR1AP61163 376 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 DSC2Q02487 901 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 ITKQ08881 620 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 NFATC3Q12968 1075 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 SQSTM1Q13501 440 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 NCBP2-AS2Q69YL0 99 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 MARK2Q7KZI7 788 aaKnown RBP20.18■□□□□ 0.82
PABPC1-217ENST00000521067 NLRP8Q86W28 1048 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 MAML1Q92585 1016 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 FUCA2Q9BTY2 467 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 B3GNT4Q9C0J1 378 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 SEPT10Q9P0V9 454 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 IP6K2Q9UHH9 426 aa20.18■□□□□ 0.82
PABPC1-217ENST00000521067 HGSO14964 777 aaPredicted RBP20.17■□□□□ 0.82
PABPC1-217ENST00000521067 SLC28A2O43868 658 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 SERPINC1P01008 464 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 ITGB2P05107 769 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 FAM87AP0C7U9 286 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 GARSP41250 739 aaKnown RBP20.17■□□□□ 0.82
PABPC1-217ENST00000521067 STC1P52823 247 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 NIPAL4Q0D2K0 466 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 GALNT2Q10471 571 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 DPYSL3Q14195 570 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 KRT81Q14533 505 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 TBR1Q16650 682 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 CLPPQ16740 277 aaPredicted RBP20.17■□□□□ 0.82
PABPC1-217ENST00000521067 TDRD12Q587J7 1177 aaKnown RBP20.17■□□□□ 0.82
PABPC1-217ENST00000521067 ALG1LQ6GMV1 187 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 ZNF761Q86XN6 746 aaPredicted RBP20.17■□□□□ 0.82
PABPC1-217ENST00000521067 LRRC49Q8IUZ0 686 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 OR4D9Q8NGE8 314 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 ARRDC2Q8TBH0 407 aa20.17■□□□□ 0.82
PABPC1-217ENST00000521067 COX14Q96I36 57 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms