RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 POLR2CP19387 275 aaPredicted RBP2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CORO1AP31146 461 aaKnown RBP2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SHMT1P34896 483 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TRAPPC10P48553 1259 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 EFNA5P52803 228 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ISL1P61371 349 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 UBE3AQ05086 875 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 NAE1Q13564 534 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TDGQ13569 410 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SLC1A5Q15758 541 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 C2orf68Q2NKX9 166 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 MAP3K21Q5TCX8 1036 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 DUS1LQ6P1R4 473 aaKnown RBP2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ASB18Q6ZVZ8 466 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 MYPOPQ86VE0 399 aaPredicted RBP2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 DHX40Q8IX18 779 aaKnown RBP2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SPEM1Q8N4L4 309 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PLD5Q8N7P1 536 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 HCAR2Q8TDS4 363 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ELP4Q96EB1 424 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ST6GAL2Q96JF0 529 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZSCAN31Q96LW9 406 aaPredicted RBP2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 C20orf141Q9NUB4 165 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TMEM160Q9NX00 188 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 OGFRQ9NZT2 677 aa2.73□□□□□ -1.97
RNU6-1088P-201ENST00000516850 UTYO14607 1347 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 IGLV5-45A0A087WSX0 123 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 BLOC1S5-TXNDC5H3BN57 136 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CHRNB4P30926 498 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 GNAQP50148 359 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CSNK2A1P68400 391 aaPredicted RBP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZNF234Q14588 700 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 RNPS1Q15287 305 aaKnown RBP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZNF766Q5HY98 468 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 STXBP5Q5T5C0 1151 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 C10orf62Q5T681 223 aaPredicted RBP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 NAA35Q5VZE5 725 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TXNDC8Q6A555 127 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ATF7IPQ6VMQ6 1270 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 BBS12Q6ZW61 710 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SLC46A3Q7Z3Q1 461 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 GPR180Q86V85 440 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SUGP1Q8IWZ8 645 aaKnown RBP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ADAD2Q8NCV1 583 aaKnown RBP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 CSNK2A3Q8NEV1 391 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ZCCHC10Q8TBK6 192 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TM9SF4Q92544 642 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 TAF15Q92804 592 aaKnown RBP eCLIP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 ORAI1Q96D31 301 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 SCRN2Q96FV2 425 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 C17orf77Q96MU5 243 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 LITAFQ99732 161 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 FAM110AQ9BQ89 295 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PHF7Q9BWX1 381 aaPredicted RBP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 HEMGNQ9BXL5 484 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 IFIH1Q9BYX4 1025 aaKnown RBP2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 MMP25Q9NPA2 562 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 RIC8AQ9NPQ8 531 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 HCFC1R1Q9NWW0 138 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 POLG2Q9UHN1 485 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 A4GNTQ9UNA3 340 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 KCNK7Q9Y2U2 307 aa2.72□□□□□ -1.97
RNU6-1088P-201ENST00000516850 COL2A1P02458 1487 aaPredicted RBP2.71□□□□□ -1.97
RNU6-1088P-201ENST00000516850 PTPRCP08575 1304 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 A0A0G2JLW4 131 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SMIM1B2RUZ4 78 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 TSPAN4O14817 238 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SPINT2O43291 252 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SYNGR3O43761 229 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 EGFP01133 1207 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 COX7A2P14406 83 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SIGIRRQ6IA17 410 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 OR7E24Q6IFN5 339 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 FAM171BQ6P995 826 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ZNF704Q6ZNC4 412 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 PLEKHM3Q6ZWE6 761 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SRBD1Q8N5C6 995 aaKnown RBP2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 STPG4Q8N801 248 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 KLHDC9Q8NEP7 349 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 OR2AK2Q8NG84 335 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 DNAAF4Q8WXU2 420 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 KIF1BPQ96EK5 621 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 LINGO1Q96FE5 620 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 SLC39A13Q96H72 371 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 EIF2AK1Q9BQI3 630 aaKnown RBP2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 FSD1Q9BTV5 496 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 KCNN2Q9H2S1 579 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 DLGAP4Q9Y2H0 992 aa2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 AAR2Q9Y312 384 aaKnown RBP2.71□□□□□ -1.98
RNU6-1088P-201ENST00000516850 HHLA1C9JL84 531 aa2.7□□□□□ -1.98
RNU6-1088P-201ENST00000516850 USP17L23D6RBM5 183 aa2.7□□□□□ -1.98
RNU6-1088P-201ENST00000516850 CLIC2O15247 247 aa2.7□□□□□ -1.98
RNU6-1088P-201ENST00000516850 NBNO60934 754 aa2.7□□□□□ -1.98
RNU6-1088P-201ENST00000516850 TCEA3O75764 348 aa2.7□□□□□ -1.98
RNU6-1088P-201ENST00000516850 IGHV4-39P01824 125 aa2.7□□□□□ -1.98
RNU6-1088P-201ENST00000516850 HOXB5P09067 269 aa2.7□□□□□ -1.98
RNU6-1088P-201ENST00000516850 FAM106CPP0CH98 169 aa2.7□□□□□ -1.98
RNU6-1088P-201ENST00000516850 ZNF23P17027 643 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms