RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 DOK6Q6PKX4 331 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 MCOLN2Q8IZK6 566 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 OR10G6Q8NH81 332 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 APOBEC4Q8WW27 367 aaKnown RBP15.69■□□□□ 0.1
LMNA-223ENST00000515459 SCARF2Q96GP6 870 aaPredicted RBP15.69■□□□□ 0.1
LMNA-223ENST00000515459 ABHD17AQ96GS6 310 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 ZNF599Q96NL3 588 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 OR2M4Q96R27 311 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 SLC38A3Q99624 504 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 AGPAT1Q99943 283 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 SNRNP25Q9BV90 132 aaKnown RBP15.69■□□□□ 0.1
LMNA-223ENST00000515459 MAN2B2Q9Y2E5 1009 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 SIK3Q9Y2K2 1263 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 PLEKHM1Q9Y4G2 1056 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 RELNP78509 3460 aa15.69■□□□□ 0.1
LMNA-223ENST00000515459 LOC101059948A0A1B0GTJ6 334 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 A8MU76 341 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 PSMA2P25787 234 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 HSPA9P38646 679 aaKnown RBP15.68■□□□□ 0.1
LMNA-223ENST00000515459 GPR1P46091 355 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 MC2RQ01718 297 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 MC1RQ01726 317 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 DPTQ07507 201 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 PPP6R3Q5H9R7 873 aaPredicted RBP15.68■□□□□ 0.1
LMNA-223ENST00000515459 SNAP47Q5SQN1 464 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 ACAD10Q6JQN1 1059 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 CEACAM20Q6UY09 585 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 ZNF761Q86XN6 746 aaPredicted RBP15.68■□□□□ 0.1
LMNA-223ENST00000515459 FAM26EQ8N5C1 309 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 LZTR1Q8N653 840 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 NEK11Q8NG66 645 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 SLC37A2Q8TED4 501 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 SCRN2Q96FV2 425 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 PCMTD1Q96MG8 357 aaPredicted RBP15.68■□□□□ 0.1
LMNA-223ENST00000515459 NUDCD1Q96RS6 583 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 KCTD15Q96SI1 283 aaPredicted RBP15.68■□□□□ 0.1
LMNA-223ENST00000515459 CTRCQ99895 268 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 ZPBPQ9BS86 351 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 PCSK1NQ9UHG2 260 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 LRRK2Q5S007 2527 aa15.68■□□□□ 0.1
LMNA-223ENST00000515459 TRBV23OR9-2A0A075B6M9 112 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 NPIPB15A6NHN6 443 aaPredicted RBP15.67■□□□□ 0.1
LMNA-223ENST00000515459 OAS2P29728 719 aaKnown RBP15.67■□□□□ 0.1
LMNA-223ENST00000515459 HCAR3P49019 387 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 ZNF135P52742 658 aaPredicted RBP15.67■□□□□ 0.1
LMNA-223ENST00000515459 ABHD18Q0P651 414 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 SEPT6Q14141 434 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 DEFB109BQ30KR1 87 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 LACTB2Q53H82 288 aaPredicted RBP15.67■□□□□ 0.1
LMNA-223ENST00000515459 PYCR3Q53H96 274 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 CDKAL1Q5VV42 579 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 WDR74Q6RFH5 385 aaPredicted RBP15.67■□□□□ 0.1
LMNA-223ENST00000515459 TIPARPQ7Z3E1 657 aaKnown RBP15.67■□□□□ 0.1
LMNA-223ENST00000515459 KDELC2Q7Z4H8 507 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 ARHGAP22Q7Z5H3 698 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 TECPR1Q7Z6L1 1165 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 UNC5BQ8IZJ1 945 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 SFRP1Q8N474 314 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 PEBP4Q96S96 227 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 TRIT1Q9H3H1 467 aaKnown RBP15.67■□□□□ 0.1
LMNA-223ENST00000515459 FBXO8Q9NRD0 319 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 TMEM98Q9Y2Y6 226 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 TMEM184BQ9Y519 407 aaPredicted RBP15.67■□□□□ 0.1
LMNA-223ENST00000515459 NBASA2RRP1 2371 aa15.67■□□□□ 0.1
LMNA-223ENST00000515459 PRPSAP2O60256 369 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 RNF8O76064 485 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 STK17BO94768 372 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 TRAF2Q12933 501 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 MAMLD1Q13495 774 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 LRP8Q14114 963 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 CRTC2Q53ET0 693 aaPredicted RBP15.66■□□□□ 0.1
LMNA-223ENST00000515459 ADAMTSL4Q6UY14 1074 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 USP45Q70EL2 814 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 MARK2Q7KZI7 788 aaKnown RBP15.66■□□□□ 0.1
LMNA-223ENST00000515459 TSPAN33Q86UF1 283 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 GALNT13Q8IUC8 556 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 TP53INP2Q8IXH6 220 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 BBS5Q8N3I7 341 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 PGBD5Q8N414 524 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 ARFGAP1Q8N6T3 406 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 ENOX1Q8TC92 643 aaKnown RBP15.66■□□□□ 0.1
LMNA-223ENST00000515459 STARD8Q92502 1023 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 AP2M1Q96CW1 435 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 PSMG3-AS1Q96PY0 264 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 MCCC1Q96RQ3 725 aaPredicted RBP15.66■□□□□ 0.1
LMNA-223ENST00000515459 NOD2Q9HC29 1040 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 PARVAQ9NVD7 372 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 CWC15Q9P013 229 aaKnown RBP15.66■□□□□ 0.1
LMNA-223ENST00000515459 CD84Q9UIB8 345 aa15.66■□□□□ 0.1
LMNA-223ENST00000515459 PRR19A6NJB7 356 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 PGLSO95336 258 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 MAP3K6O95382 1288 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 SOD1P00441 154 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 PYGLP06737 847 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 TCN2P20062 427 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 NOP2P46087 812 aaKnown RBP15.65■□□□□ 0.1
LMNA-223ENST00000515459 HHEXQ03014 270 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 KLRB1Q12918 225 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 DPYSQ14117 519 aa15.65■□□□□ 0.1
LMNA-223ENST00000515459 PTPRRQ15256 657 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms