RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ANKRD20A8PQ5CZ79 823 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 LRRC66Q68CR7 880 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 RFLNAQ6ZTI6 216 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 MARK2Q7KZI7 788 aaKnown RBP15.34■□□□□ 0.05
TPM3-219ENST00000509409 TMEM159Q96B96 161 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 MCCC1Q96RQ3 725 aaPredicted RBP15.34■□□□□ 0.05
TPM3-219ENST00000509409 SEMA6CQ9H3T2 930 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 SEPT10Q9P0V9 454 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 CHKBQ9Y259 395 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 SSUH2Q9Y2M2 353 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 LRRK1Q38SD2 2015 aa15.34■□□□□ 0.05
TPM3-219ENST00000509409 NVLO15381 856 aaKnown RBP15.33■□□□□ 0.04
TPM3-219ENST00000509409 PROSCO94903 275 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 ASMTLO95671 621 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 IVLP07476 585 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 H2AFZP0C0S5 128 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 CA4P22748 312 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 CCNCP24863 283 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 CASP14P31944 242 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 ACTR1BP42025 376 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 ARSEP51690 589 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 ACTR1AP61163 376 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 DSC2Q02487 901 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 DPTQ07507 201 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 GALNT2Q10471 571 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 LY6DQ14210 128 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 PDK2Q15119 407 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 TGIF1Q15583 401 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 NCBP2-AS2Q69YL0 99 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 H2AFVQ71UI9 128 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 CPNE8Q86YQ8 564 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 CCNYQ8ND76 341 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 FAM71BQ8TC56 605 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 LRRN4Q8WUT4 740 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 PTCD2Q8WV60 388 aaKnown RBP15.33■□□□□ 0.04
TPM3-219ENST00000509409 SNRNP27Q8WVK2 155 aaKnown RBP15.33■□□□□ 0.04
TPM3-219ENST00000509409 CTNNBL1Q8WYA6 563 aaPredicted RBP15.33■□□□□ 0.04
TPM3-219ENST00000509409 USP7Q93009 1102 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 SCAMP4Q969E2 229 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 SMIM14Q96QK8 99 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 RDH14Q9HBH5 336 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 SLC17A4Q9Y2C5 497 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 PLEKHM1Q9Y4G2 1056 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 PCDHB11Q9Y5F2 797 aa15.33■□□□□ 0.04
TPM3-219ENST00000509409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.33■□□□□ 0.041e-10■■■□□ 17.4
TPM3-219ENST00000509409 MGAQ8IWI9 3026 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 TRBV23OR9-2A0A075B6M9 112 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 A0A0J9YYE9 177 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 FZD6O60353 706 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 CPNE6O95741 557 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 TRBC1P01850 177 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 GYPCP04921 128 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 PYGLP06737 847 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 TPM3P06753 285 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 KRT7P08729 469 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 ZNF30P17039 623 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 MX2P20592 715 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 ADAMTSL4Q6UY14 1074 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 TMPRSS9Q7Z410 1059 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 TRIM74Q86UV6 250 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 SLITRK4Q8IW52 837 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 LPCAT1Q8NF37 534 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 PATE1Q8WXA2 126 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 MAML1Q92585 1016 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 TTC9Q92623 222 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 OR2M4Q96R27 311 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 ZNF670Q9BS34 389 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 ZMYND15Q9H091 742 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 CDH19Q9H159 772 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 DEF6Q9H4E7 631 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 UVRAGQ9P2Y5 699 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 DNPEPQ9ULA0 475 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 KIF26BQ2KJY2 2108 aa15.32■□□□□ 0.04
TPM3-219ENST00000509409 PRAMEF33A0A0G2JMD5 474 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 INPP4BO15327 924 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 PRAMEF10O60809 474 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 CLDN7O95471 211 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 JCHAINP01591 159 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 ETV5P41161 510 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 TAS2R40P59535 323 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 MANEAQ5SRI9 462 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 TMEM164Q5U3C3 297 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 NKAIN2Q5VXU1 208 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 NLRP8Q86W28 1048 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 C17orf82Q86X59 251 aaPredicted RBP15.31■□□□□ 0.04
TPM3-219ENST00000509409 ZFAND4Q86XD8 727 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 GALNT13Q8IUC8 556 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 NRSN1Q8IZ57 195 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 EXD1Q8NHP7 514 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 ZNF830Q96NB3 372 aaPredicted RBP15.31■□□□□ 0.04
TPM3-219ENST00000509409 TSGA13Q96PP4 275 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 AGAP2Q99490 1192 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 NUDT22Q9BRQ3 303 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 RIOK2Q9BVS4 552 aaKnown RBP15.31■□□□□ 0.04
TPM3-219ENST00000509409 PCDH9Q9HC56 1237 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 AMACRQ9UHK6 382 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 ZNHIT2Q9UHR6 403 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 LCMT1Q9UIC8 334 aa15.31■□□□□ 0.04
TPM3-219ENST00000509409 PPM1DO15297 605 aa15.3■□□□□ 0.04
TPM3-219ENST00000509409 EFSO43281 561 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms