RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 NAXDQ8IW45 347 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 RCOR2Q8IZ40 523 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 ALDH16A1Q8IZ83 802 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TTC30BQ8N4P2 665 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 GPR161Q8N6U8 529 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 MFSD2AQ8NA29 543 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 CCNYQ8ND76 341 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 CCDC110Q8TBZ0 833 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 HCAR2Q8TDS4 363 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PDCD6IPQ8WUM4 868 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 HTR3CQ8WXA8 447 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 OR1E3Q8WZA6 343 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 LENG8Q96PV6 779 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 LYSMD1Q96S90 227 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 ELF4Q99607 663 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 RTKNQ9BST9 563 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 LRRC61Q9BV99 259 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 LGR4Q9BXB1 951 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC25A51Q9H1U9 297 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 GBA3Q9H227 469 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 DYRK4Q9NR20 520 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TM7SF3Q9NS93 570 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 DONSONQ9NYP3 566 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 UBP1Q9NZI7 540 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 CD84Q9UIB8 345 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 AMFRQ9UKV5 643 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PCOLCE2Q9UKZ9 415 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TMPRSS11EQ9UL52 423 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 DNPEPQ9ULA0 475 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 OR1A2Q9Y585 309 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 USP24Q9UPU5 2620 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 SPTY2D1-AS1A0A0U1RR47 76 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 TMEM202A6NGA9 273 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 A6NNZ2 444 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 FADS2P1A8MWK0 482 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 MIF4GDA9UHW6 222 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 TRIM38O00635 465 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ENC1O14682 589 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 TM7SF2O76062 418 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 KCNK5O95279 499 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 IPO7O95373 1038 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 METTL18O95568 372 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ATP1A1P05023 1023 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF883P0CG24 379 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 RBP3P10745 1247 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ETS1P14921 441 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 GNSP15586 552 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ZFXP17010 805 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 AKT2P31751 481 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 RXRGP48443 463 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 CCT8P50990 548 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 RENBPP51606 427 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 NAP1L1P55209 391 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 EIF3EP60228 445 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 PTPRCAPQ14761 206 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 PCSK7Q16549 785 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 KHDC1Q4VXA5 237 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 TEX44Q53QW1 395 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 PPM1JQ5JR12 505 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 RALGPS1Q5JS13 557 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ARMC12Q5T9G4 340 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 N4BP2L1Q5TBK1 243 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 FAXCQ5TGI0 409 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 DENND5AQ6IQ26 1287 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ESRP1Q6NXG1 681 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 TTC27Q6P3X3 843 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 Q6ZVL8 140 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 RABEPKQ7Z6M1 372 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ADAT2Q7Z6V5 191 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 IQCHQ86VS3 1027 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 MARCH9Q86YJ5 346 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC13A5Q86YT5 568 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC35F6Q8N357 371 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC25A45Q8N413 288 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 RNF10Q8N5U6 811 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 CXorf40AQ8TE69 158 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 FBF1Q8TES7 1133 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 TFB1MQ8WVM0 346 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 UBXN4Q92575 508 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 P3H4Q92791 437 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 SCAMP4Q969E2 229 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 RTP4Q96DX8 246 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 SCRN2Q96FV2 425 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 CLPBQ9H078 707 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ABCG8Q9H221 673 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 PCDH9Q9HC56 1237 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 LUC7LQ9NQ29 371 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 MRPL40Q9NQ50 206 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 AMACRQ9UHK6 382 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 CNOT6Q9ULM6 557 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 PHTF1Q9UMS5 762 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 EFR3BQ9Y2G0 817 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF711Q9Y462 761 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 OAS3Q9Y6K5 1087 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 DMXL2Q8TDJ6 3036 aa7.2□□□□□ -1.26
TOPBP1-207ENST00000509162 LOC285095A0A1B0GVY8 99 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 CFAP69A5D8W1 941 aa7.19□□□□□ -1.26
TOPBP1-207ENST00000509162 HACD1B0YJ81 288 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms