RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 SUDS3Q9H7L9 328 aaPredicted RBP16.17■□□□□ 0.18
LMNA-222ENST00000508500 KCTD5Q9NXV2 234 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 LRIT1Q9P2V4 623 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 SUFUQ9UMX1 484 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 SLC17A4Q9Y2C5 497 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 FLNBO75369 2602 aaKnown RBP16.17■□□□□ 0.18
LMNA-222ENST00000508500 SDK2Q58EX2 2172 aa16.17■□□□□ 0.18
LMNA-222ENST00000508500 TEX51A0A1B0GUA7 166 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 PDE2AO00408 941 aaPredicted RBP16.16■□□□□ 0.18
LMNA-222ENST00000508500 B4GAT1O43505 415 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 TNFSF15O95150 251 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 PNLIPP16233 465 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 GNPDA1P46926 289 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 STC1P52823 247 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 MAZP56270 477 aaKnown RBP16.16■□□□□ 0.18
LMNA-222ENST00000508500 CXADRP78310 365 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 ZBTB17Q13105 803 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 SPRED1Q7Z699 444 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 CLEC14AQ86T13 490 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 TRIM74Q86UV6 250 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 CCNJLQ8IV13 435 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 ZNF843Q8N446 348 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 OR6C4Q8NGE1 309 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 KCNE4Q8WWG9 221 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 PATE1Q8WXA2 126 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 SCARF2Q96GP6 870 aaPredicted RBP16.16■□□□□ 0.18
LMNA-222ENST00000508500 CPNE5Q9HCH3 593 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 THSD1Q9NS62 852 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 TRNAU1APQ9NX07 287 aaKnown RBP16.16■□□□□ 0.18
LMNA-222ENST00000508500 AMACRQ9UHK6 382 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 TMEM98Q9Y2Y6 226 aa16.16■□□□□ 0.18
LMNA-222ENST00000508500 PCYT1BQ9Y5K3 369 aaPredicted RBP16.16■□□□□ 0.18
LMNA-222ENST00000508500 GOLGA6CA6NDK9 693 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 GOLGA6BA6NDN3 693 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 CAPN8A6NHC0 703 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 KCNK1O00180 336 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 KLK10O43240 276 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 CBFA2T2O43439 604 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 MFAP3LO75121 409 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 MTA2O94776 668 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 CLDN7O95471 211 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 JCHAINP01591 159 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 IVLP07476 585 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 GOLGA6DP0CG33 693 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 HGFP14210 728 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 RBMS1P29558 406 aaKnown RBP16.15■□□□□ 0.18
LMNA-222ENST00000508500 CDC25BP30305 580 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 CCKBRP32239 447 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 UGT1A5P35504 534 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 GPR1P46091 355 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 CTBSQ01459 385 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 ZFP36L1Q07352 338 aaKnown RBP16.15■□□□□ 0.18
LMNA-222ENST00000508500 PPIDQ08752 370 aaKnown RBP16.15■□□□□ 0.18
LMNA-222ENST00000508500 TRIM14Q14142 442 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 TSR1Q2NL82 804 aaKnown RBP16.15■□□□□ 0.18
LMNA-222ENST00000508500 SLC9A4Q6AI14 798 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 NPNTQ6UXI9 565 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 ADAMTSL4Q6UY14 1074 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 GPR155Q7Z3F1 870 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 NLRP8Q86W28 1048 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 MAP7D3Q8IWC1 876 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 CCDC13Q8IYE1 715 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 NAGSQ8N159 534 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 AP2M1Q96CW1 435 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 MRFAP1L1Q96HT8 127 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 LYSMD1Q96S90 227 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 NHEJ1Q9H9Q4 299 aaPredicted RBP16.15■□□□□ 0.18
LMNA-222ENST00000508500 PCDH9Q9HC56 1237 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 EPB41L5Q9HCM4 733 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 GOLGA6AQ9NYA3 693 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 TAAR2Q9P1P5 351 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 TTLL3Q9Y4R7 772 aa16.15■□□□□ 0.18
LMNA-222ENST00000508500 EIF4E1BA6NMX2 242 aaKnown RBP16.14■□□□□ 0.17
LMNA-222ENST00000508500 PLD2O14939 933 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 NUDT21O43809 227 aaKnown RBP16.14■□□□□ 0.17
LMNA-222ENST00000508500 AKR1B10O60218 316 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 ZIC2O95409 532 aaPredicted RBP16.14■□□□□ 0.17
LMNA-222ENST00000508500 ECEL1O95672 775 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 TPM3P06753 285 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 ZNF30P17039 623 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 CES1P23141 567 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 NFKBIAP25963 317 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 ADCY8P40145 1251 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 INHBCP55103 352 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 TBX2Q13207 712 aaPredicted RBP16.14■□□□□ 0.17
LMNA-222ENST00000508500 QPCTQ16769 361 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 DOK6Q6PKX4 331 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 B4GALNT4Q76KP1 1039 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 ZNF765Q7L2R6 523 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 RAB11FIP2Q7L804 512 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 SLITRK4Q8IW52 837 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 ARL14Q8N4G2 192 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 ZDHHC1Q8WTX9 485 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 SNRNP27Q8WVK2 155 aaKnown RBP16.14■□□□□ 0.17
LMNA-222ENST00000508500 EID2BQ96D98 161 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 COX14Q96I36 57 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 RIOK2Q9BVS4 552 aaKnown RBP16.14■□□□□ 0.17
LMNA-222ENST00000508500 GSDMCQ9BYG8 508 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 DPH1Q9BZG8 443 aa16.14■□□□□ 0.17
LMNA-222ENST00000508500 TRIM5Q9C035 493 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms