RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TMPRSS11EQ9UL52 423 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 NR2E1Q9Y466 385 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 PMF1-BGLAPU3KQ54 211 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 TAF1P21675 1872 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 CDK5RAP2Q96SN8 1893 aa10.81□□□□□ -0.68
PDLIM5-210ENST00000508216 TAF1LQ8IZX4 1826 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 A0A0B4J269 797 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 KHNYNO15037 678 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PER2O15055 1255 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PHGDHO43175 533 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CA12O43570 354 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 AKAP8O43823 692 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 TBC1D4O60343 1298 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 FAM13AO94988 1023 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 GABARAPO95166 117 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PTBP3O95758 552 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 C1QBP02746 253 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 RBP1P09455 135 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 RRASP10301 218 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CYP2C8P10632 490 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF250P15622 560 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 GJA1P17302 382 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 TNNI3P19429 210 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CALML3P27482 149 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 IL1R2P27930 398 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 EPHX2P34913 555 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CTNNB1P35222 781 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ETV4P43268 484 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 WNT7BP56706 349 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ERVFC1P60507 584 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ERVK-8P63133 956 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF45Q02386 682 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 GRIK2Q13002 908 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC13A2Q13183 592 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PUM1Q14671 1186 aaKnown RBP eCLIP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 STARD3Q14849 445 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ZMYND11Q15326 602 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ANGPT1Q15389 498 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 KLHL12Q53G59 568 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 MANEALQ5VSG8 457 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 FAM160B1Q5W0V3 765 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 STEAP3Q658P3 488 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 SLFN12LQ6IEE8 588 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 G2E3Q7L622 706 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ALYREFQ86V81 257 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 HIPK1Q86Z02 1210 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 DEDD2Q8WXF8 326 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC7A6Q92536 515 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PROX1Q92786 737 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 KIAA1191Q96A73 305 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 NTAN1Q96AB6 310 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 C9orf72Q96LT7 481 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CSF3RQ99062 836 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PKP2Q99959 881 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 KCTD14Q9BQ13 255 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 OSGEPL1Q9H4B0 414 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 MAGEF1Q9HAY2 307 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 LRRC4Q9HBW1 653 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 GLRX2Q9NS18 164 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CUEDC1Q9NWM3 386 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 GDE1Q9NZC3 331 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CYTH4Q9UIA0 394 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 TRHDEQ9UKU6 1024 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 GAB2Q9UQC2 676 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 MTF2Q9Y483 593 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 KLF18A0A0U1RQI7 1052 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 TRIM49BA6NDI0 452 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 TRABD2BA6NFA1 517 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 A8MUA0 341 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PRR5-ARHGAP8B1AHC4 643 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 TCP10L2B9ZVM9 353 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 USP17L10C9JJH3 530 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 HUS1O60921 280 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CSF1RP07333 972 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 RALBP11234 206 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PRG2P13727 222 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 SLC9A1P19634 815 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 EPHA3P29320 983 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ADRA1BP35368 520 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 SULT1E1P49888 294 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PMS1P54277 932 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ARHGAP8P85298 464 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 SMAD2Q15796 467 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 CHRNA2Q15822 529 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 DUSP6Q16828 381 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 TMEM44Q2T9K0 475 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 GPR33Q49SQ1 333 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 GPAT3Q53EU6 434 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 INTS11Q5TA45 600 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ANGEL2Q5VTE6 544 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 DCAF12L1Q5VU92 463 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 PNCKQ6P2M8 343 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ZNF530Q6P9A1 599 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 LRFN4Q6PJG9 635 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ISLR2Q6UXK2 745 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 NAPRTQ6XQN6 538 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 LIPIQ6XZB0 460 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 LUZP2Q86TE4 346 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 IFNL2Q8IZJ0 200 aa10.8□□□□□ -0.68
PDLIM5-210ENST00000508216 ANKFN1Q8N957 763 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms