RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GPR33Q49SQ1 333 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 SPANXN3Q5MJ09 141 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 TPRG1LQ5T0D9 272 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 CERCAMQ5T4B2 595 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZFYVE27Q5T4F4 411 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 MACC1Q6ZN28 852 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 TTC16Q8NEE8 873 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 LPCAT1Q8NF37 534 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 RMI1Q9H9A7 625 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 TM9SF3Q9HD45 589 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 GULP1Q9UBP9 304 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 PCOLCE2Q9UKZ9 415 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 FNDC3AQ9Y2H6 1198 aaKnown RBP8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 MED16Q9Y2X0 877 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 ARL5AQ9Y689 179 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 DNMT3AQ9Y6K1 912 aaPredicted RBP8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 FRYLO94915 3013 aa8.25□□□□□ -1.09
CDC42SE2-208ENST00000505065 FAM159BA6NKW6 160 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 RNASEH2AO75792 299 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 TM7SF2O76062 418 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 CRTAMO95727 393 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 FUCA1P04066 466 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 MYCLP1P12525 358 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 SEMA3AQ14563 771 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 FBXL19Q6PCT2 694 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 RFLNAQ6ZTI6 216 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 PLA2G15Q8NCC3 412 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 IPMKQ8NFU5 416 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 CEP76Q8TAP6 659 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 NUS1Q96E22 293 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 OMDQ99983 421 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 EPB41L5Q9HCM4 733 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 DNAH14Q0VDD8 3507 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 SDR42E2A6NKP2 422 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 KPNA3O00505 521 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 PMPCBO75439 489 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 RECQL5O94762 991 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 SLU7O95391 586 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 TTC4O95801 387 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 OGNP20774 298 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ARSDP51689 593 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 SPARCL1Q14515 664 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 FAXCQ5TGI0 409 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 KLHL7Q8IXQ5 586 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 NDUFAF2Q8N183 169 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ENAMQ9NRM1 1142 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 TMEM74BQ9NUR3 256 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 UBP1Q9NZI7 540 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 SPTY2D1-AS1A0A0U1RR47 76 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 PRR5-ARHGAP8B1AHC4 643 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 RETP07949 1114 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZNF806P0C7X5 589 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 GCAP28676 217 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 EIF2B5Q13144 721 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 NAB1Q13506 487 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 C8orf74Q6P047 294 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 SYT12Q8IV01 421 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 C2CD4AQ8NCU7 369 aaPredicted RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 CDKN2AIPNLQ96HQ2 116 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZNF778Q96MU6 729 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 TPSD1Q9BZJ3 242 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZDHHC5Q9C0B5 715 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 PKD2L2Q9NZM6 624 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 KLHL33A6NCF5 533 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 K7ESM1 405 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 PRKCGP05129 697 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ACADMP11310 421 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ACRV1P26436 265 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 SPAM1P38567 509 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 RABIFP47224 123 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 DHX9Q08211 1270 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 NFATC2Q13469 925 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 FZD2Q14332 565 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ANKRD20A4Q4UJ75 823 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 CCDC38Q502W7 563 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 DNAJC21Q5F1R6 531 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 TNFAIP8L3Q5GJ75 292 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 LYPLAL1Q5VWZ2 237 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 LPCAT2Q7L5N7 544 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 FBXO25Q8TCJ0 367 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 BTN2A2Q8WVV5 523 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 ULK4Q96C45 1275 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 AGAP2Q99490 1192 aa8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 UTP11Q9Y3A2 253 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-208ENST00000505065 VPS13AQ96RL7 3174 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 A6NNZ2 444 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 MMP20O60882 483 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CEACAM5P06731 702 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 APRTP07741 180 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 MYBL2P10244 700 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 HADHAP40939 763 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ETV3P41162 512 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 LEPRP48357 1165 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CDK3Q00526 305 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ITIH4Q14624 930 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 NFATC4Q14934 902 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZC3H14Q6PJT7 736 aaKnown RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 CCNI2Q6ZMN8 369 aaPredicted RBP8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 SNX20Q7Z614 316 aa8.23□□□□□ -1.09
CDC42SE2-208ENST00000505065 ADGRG6Q86SQ4 1221 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms