RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 USP8P40818 1118 aa6□□□□□ -1.45
GYPB-204ENST00000504951 NOP2P46087 812 aaKnown RBP6□□□□□ -1.45
GYPB-204ENST00000504951 LIG3P49916 1009 aa6□□□□□ -1.45
GYPB-204ENST00000504951 DNA2P51530 1060 aa6□□□□□ -1.45
GYPB-204ENST00000504951 PGDP52209 483 aa6□□□□□ -1.45
GYPB-204ENST00000504951 ILF3Q12906 894 aaKnown RBP eCLIP6□□□□□ -1.45
GYPB-204ENST00000504951 NME3Q13232 169 aa6□□□□□ -1.45
GYPB-204ENST00000504951 UGT8Q16880 541 aa6□□□□□ -1.45
GYPB-204ENST00000504951 SLC25A52Q3SY17 297 aa6□□□□□ -1.45
GYPB-204ENST00000504951 AMZ1Q400G9 498 aa6□□□□□ -1.45
GYPB-204ENST00000504951 CRB2Q5IJ48 1285 aa6□□□□□ -1.45
GYPB-204ENST00000504951 CHCHD2P9Q5T1J5 151 aaPredicted RBP6□□□□□ -1.45
GYPB-204ENST00000504951 MANEALQ5VSG8 457 aa6□□□□□ -1.45
GYPB-204ENST00000504951 KCTD16Q68DU8 428 aa6□□□□□ -1.45
GYPB-204ENST00000504951 JMJD6Q6NYC1 403 aaPredicted RBP6□□□□□ -1.45
GYPB-204ENST00000504951 ERAP2Q6P179 960 aa6□□□□□ -1.45
GYPB-204ENST00000504951 PNCKQ6P2M8 343 aa6□□□□□ -1.45
GYPB-204ENST00000504951 C16orf46Q6P387 395 aa6□□□□□ -1.45
GYPB-204ENST00000504951 TRIM65Q6PJ69 517 aa6□□□□□ -1.45
GYPB-204ENST00000504951 C6orf15Q6UXA7 325 aaPredicted RBP6□□□□□ -1.45
GYPB-204ENST00000504951 KDELC2Q7Z4H8 507 aa6□□□□□ -1.45
GYPB-204ENST00000504951 NLRP14Q86W24 1093 aa6□□□□□ -1.45
GYPB-204ENST00000504951 NLRP8Q86W28 1048 aa6□□□□□ -1.45
GYPB-204ENST00000504951 SFTPA2Q8IWL1 248 aa6□□□□□ -1.45
GYPB-204ENST00000504951 Q8NA96 180 aa6□□□□□ -1.45
GYPB-204ENST00000504951 CCL4L1Q8NHW4 92 aa6□□□□□ -1.45
GYPB-204ENST00000504951 SH3KBP1Q96B97 665 aa6□□□□□ -1.45
GYPB-204ENST00000504951 POM121Q96HA1 1249 aa6□□□□□ -1.45
GYPB-204ENST00000504951 GDAP1L1Q96MZ0 367 aa6□□□□□ -1.45
GYPB-204ENST00000504951 AGAP3Q96P47 875 aa6□□□□□ -1.45
GYPB-204ENST00000504951 TUBGCP5Q96RT8 1024 aa6□□□□□ -1.45
GYPB-204ENST00000504951 SPON2Q9BUD6 331 aa6□□□□□ -1.45
GYPB-204ENST00000504951 TEX101Q9BY14 249 aa6□□□□□ -1.45
GYPB-204ENST00000504951 FRMD8Q9BZ67 464 aaPredicted RBP6□□□□□ -1.45
GYPB-204ENST00000504951 SUV39H2Q9H5I1 410 aa6□□□□□ -1.45
GYPB-204ENST00000504951 UCK1Q9HA47 277 aa6□□□□□ -1.45
GYPB-204ENST00000504951 SIX2Q9NPC8 291 aa6□□□□□ -1.45
GYPB-204ENST00000504951 PLCB1Q9NQ66 1216 aa6□□□□□ -1.45
GYPB-204ENST00000504951 TMEM248Q9NWD8 314 aa6□□□□□ -1.45
GYPB-204ENST00000504951 SIDT1Q9NXL6 827 aaKnown RBP6□□□□□ -1.45
GYPB-204ENST00000504951 MPP6Q9NZW5 540 aa6□□□□□ -1.45
GYPB-204ENST00000504951 C5AR2Q9P296 337 aa6□□□□□ -1.45
GYPB-204ENST00000504951 PADI1Q9ULC6 663 aa6□□□□□ -1.45
GYPB-204ENST00000504951 STAP1Q9ULZ2 295 aa6□□□□□ -1.45
GYPB-204ENST00000504951 SLC17A4Q9Y2C5 497 aa6□□□□□ -1.45
GYPB-204ENST00000504951 DAAM1Q9Y4D1 1078 aa6□□□□□ -1.45
GYPB-204ENST00000504951 OR1A2Q9Y585 309 aa6□□□□□ -1.45
GYPB-204ENST00000504951 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6□□□□□ -1.45
GYPB-204ENST00000504951 ACTL7AQ9Y615 435 aa6□□□□□ -1.45
GYPB-204ENST00000504951 NAV3Q8IVL0 2385 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 SSU72P8A0A1W2PR75 194 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 GOLGA6L4A6NEF3 574 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 RECQL5O94762 991 aaPredicted RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 IGSF6O95976 241 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 C9P02748 559 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 FUCA1P04066 466 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 CEACAM5P06731 702 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 FGF5P12034 268 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 MYCLP1P12525 358 aaPredicted RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 PRF1P14222 555 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 RHOQP17081 205 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 PON1P27169 355 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 ERCC5P28715 1186 aaPredicted RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 GKP32189 559 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 PTGER4P35408 488 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 DLSTP36957 453 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 GARSP41250 739 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 GABRB2P47870 512 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 MAZP56270 477 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 YBEYP58557 167 aaPredicted RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 POLR2LP62875 67 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 MRPL49Q13405 166 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 STIM1Q13586 685 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 LAMB3Q13751 1172 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 NAA30Q147X3 362 aaPredicted RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 CHRNA6Q15825 494 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 NADK2Q4G0N4 442 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 PTPN20Q4JDL3 420 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 RAB6CQ53S08 254 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 C2CD6Q53TS8 623 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 SP5Q6BEB4 398 aaPredicted RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 TRNP1Q6NT89 227 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 DPY19L2P1Q6NXN4 242 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 CYB5D1Q6P9G0 228 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 LYPD4Q6UWN0 246 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 IGFL3Q6UXB1 125 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 LIPIQ6XZB0 460 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 TFAP2DQ7Z6R9 452 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 SLC47A2Q86VL8 602 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 ZC3H18Q86VM9 953 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 FAM129CQ86XR2 697 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 DNAAF5Q86Y56 855 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 RHOT1Q8IXI2 618 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 RAVER1Q8IY67 606 aaKnown RBP5.99□□□□□ -1.45
GYPB-204ENST00000504951 NRSN1Q8IZ57 195 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 UNC5BQ8IZJ1 945 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 SFRP1Q8N474 314 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 AVL9Q8NBF6 648 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 OR10G6Q8NH81 332 aa5.99□□□□□ -1.45
GYPB-204ENST00000504951 SHC3Q92529 594 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms