RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 KIFC1Q9BW19 673 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 PHACTR1Q9C0D0 580 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 MIR1-1HGQ9H1L0 117 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 RAD18Q9NS91 495 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 ZC3H7BQ9UGR2 993 aaKnown RBP13.53□□□□□ -0.24
CPNE1-227ENST00000498056 RPS6KL1Q9Y6S9 549 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 R4GN57 208 aa13.53□□□□□ -0.24
CPNE1-227ENST00000498056 FAM237BA0A1B0GVD1 139 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 GPR39O43194 453 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 LATO43561 262 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 PAK4O96013 591 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 PAMP19021 973 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 AKT2P31751 481 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 MC4RP32245 332 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 CNR2P34972 360 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 IGFALSP35858 605 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 ARSDP51689 593 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 DCDC1P59894 354 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 SIM2Q14190 667 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 CRYMQ14894 314 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 LRRC14Q15048 493 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 SKIDA1Q1XH10 827 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 LYSMD4Q5XG99 296 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 ESRP1Q6NXG1 681 aaKnown RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 AFTPHQ6ULP2 937 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 CYP2U1Q7Z449 544 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 PTAR1Q7Z6K3 402 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 TECPR1Q7Z6L1 1165 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 SLC41A1Q8IVJ1 513 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 IGDCC3Q8IVU1 814 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 NRSN1Q8IZ57 195 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 ZBTB44Q8NCP5 570 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 DENND6BQ8NEG7 585 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 PRSS33Q8NF86 280 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 CADM4Q8NFZ8 388 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 OR13J1Q8NGT2 312 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 PYROXD1Q8WU10 500 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 FOXJ1Q92949 421 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 SERAC1Q96JX3 654 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 PLEKHG4BQ96PX9 1271 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 NAT9Q9BTE0 207 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 RIOK2Q9BVS4 552 aaKnown RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 SPATA16Q9BXB7 569 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 C1QTNF2Q9BXJ5 285 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 ABCG8Q9H221 673 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 AASDHPPTQ9NRN7 309 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 TREX1Q9NSU2 369 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 NLE1Q9NVX2 485 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 IL1RAPL1Q9NZN1 696 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 EIF2B4Q9UI10 523 aaKnown RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 CA5BQ9Y2D0 317 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.52□□□□□ -0.25
CPNE1-227ENST00000498056 TEX264Q9Y6I9 313 aa13.52□□□□□ -0.25
CPNE1-227ENST00000498056 WDFY4Q6ZS81 3184 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 OR51F1A6NGY5 319 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 METTL12A8MUP2 240 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 RAD51BO15315 384 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 HRO43593 1189 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 USP1O94782 785 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 POLBP06746 335 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 ITGALP20701 1170 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 PTGER3P43115 390 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 MAGEA4P43358 317 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 GPR1P46091 355 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 CLDN2P57739 230 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 LPAL2Q16609 132 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 WSCD2Q2TBF2 565 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 PLK5Q496M5 336 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 ANKRD20A4Q4UJ75 823 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 ZRANB3Q5FWF4 1079 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 HENMT1Q5T8I9 393 aaKnown RBP13.51□□□□□ -0.25
CPNE1-227ENST00000498056 ZDHHC20Q5W0Z9 365 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 KIAA0930Q6ICG6 404 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-227ENST00000498056 WDR93Q6P2C0 686 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 UNC5AQ6ZN44 842 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 ZNF765Q7L2R6 523 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
CPNE1-227ENST00000498056 OR6P1Q8NGX9 317 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 SLC6A18Q96N87 628 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 PRRX2Q99811 253 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 TSPYL1Q9H0U9 437 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 DUSP15Q9H1R2 295 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-227ENST00000498056 CDC42EP4Q9H3Q1 356 aaKnown RBP13.51□□□□□ -0.25
CPNE1-227ENST00000498056 FAM83DQ9H4H8 585 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 SUDS3Q9H7L9 328 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-227ENST00000498056 VPS37BQ9H9H4 285 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 NFKBIL1Q9UBC1 381 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-227ENST00000498056 CRLS1Q9UJA2 301 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 DMTF1Q9Y222 760 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 SLC30A1Q9Y6M5 507 aa13.51□□□□□ -0.25
CPNE1-227ENST00000498056 A0A1W2PPC4 97 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 CCDC162PA2VCL2 907 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 RGSL1A5PLK6 1076 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 H0Y8X5 98 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 K7ESM1 405 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 FPGTO14772 594 aa13.5□□□□□ -0.25
CPNE1-227ENST00000498056 INPP4BO15327 924 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms