RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 PRAMEF1O95521 474 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 ASLP04424 464 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 SRPRAP08240 638 aaKnown RBP17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 TROVE2P10155 538 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 FDXRP22570 491 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 FMO4P31512 558 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 STX3Q13277 289 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 ITGA9Q13797 1035 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 LRRC66Q68CR7 880 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 TAS2R42Q7RTR8 314 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 RMDN2Q96LZ7 410 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 GPR78Q96P69 363 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 HEPHQ9BQS7 1158 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 AARSD1Q9BTE6 412 aaKnown RBP17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 C20orf27Q9GZN8 174 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 IGSF5Q9NSI5 407 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 ELOVL2Q9NXB9 296 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 GTSE1Q9NYZ3 720 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 SLC30A1Q9Y6M5 507 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 WASF2Q9Y6W5 498 aa17.75■□□□□ 0.43
CHRNA4-206ENST00000498043 DENND4AQ7Z401 1863 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 OR1I1O60431 355 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 APOA4P06727 396 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 SBK3P0C264 359 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 CCDC166P0CW27 439 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 MYL2P10916 166 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 TTPAP49638 278 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 ST8SIA6P61647 398 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 OCRLQ01968 901 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 FCHO2Q0JRZ9 810 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 TSNAXIP1Q2TAA8 658 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 CRTC1Q6UUV9 634 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 YAF2Q8IY57 180 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 RFWD2Q8NHY2 731 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 ANKRD49Q8WVL7 239 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 SCG3Q8WXD2 468 aaKnown RBP17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 SCRN2Q96FV2 425 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 CLDND1Q9NY35 253 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 KLHL14Q9P2G3 628 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 DCTN4Q9UJW0 460 aa17.74■□□□□ 0.43
CHRNA4-206ENST00000498043 GOLGA8CPA6NN73 597 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 ANKRD65E5RJM6 399 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 GAPDHSO14556 408 aaPredicted RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 HGSO14964 777 aaPredicted RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 SNNO75324 88 aaPredicted RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 LYPLA1O75608 230 aaPredicted RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 SRP72O76094 671 aaKnown RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 CTSLP07711 333 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 RALBP11234 206 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 LHCGRP22888 699 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 TIAL1Q01085 375 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 CACNG1Q06432 222 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 POM121L1PQ3SYA9 428 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 AARS2Q5JTZ9 985 aaKnown RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 RNF187Q5TA31 235 aaPredicted RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 TMEM207Q6UWW9 146 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 TMEM151AQ8N4L1 468 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 CPA6Q8N4T0 437 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 C7orf26Q96N11 449 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 MCCC1Q96RQ3 725 aaPredicted RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 LYSMD1Q96S90 227 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 TCF12Q99081 682 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 S1PR5Q9H228 398 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 CCDC68Q9H2F9 335 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 ABCF3Q9NUQ8 709 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 MID2Q9UJV3 735 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 ITM2AO43736 263 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 KIAA0754O94854 1291 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 IL1BP01584 269 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 SERPINE1P05121 402 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 LTA4HP09960 611 aaKnown RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 BPIP17213 487 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 FAM83EQ2M2I3 478 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 FNDC3BQ53EP0 1204 aaKnown RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 ARSIQ5FYB1 569 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 PARM1Q6UWI2 310 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 ZYG11AQ6WRX3 759 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 TPRG1Q6ZUI0 275 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 PLPP6Q8IY26 295 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 C10orf82Q8WW14 230 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 FGF14Q92915 247 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 TRIM55Q9BYV6 548 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 BRD9Q9H8M2 597 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 B4GALT6Q9UBX8 382 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 MARCOQ9UEW3 520 aaPredicted RBP17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 IL36AQ9UHA7 158 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 PLA2G4CQ9UP65 541 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 FAM50BQ9Y247 325 aa17.73■□□□□ 0.43
CHRNA4-206ENST00000498043 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 RHOBTB1O94844 696 aa17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 WISP3O95389 354 aaPredicted RBP17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 CHRM1P11229 460 aaPredicted RBP17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 KPNA2P52292 529 aaKnown RBP17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 RUNX3Q13761 415 aa17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 RDH11Q8TC12 318 aa17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 SGF29Q96ES7 293 aa17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 MRPL46Q9H2W6 279 aaKnown RBP17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 IL26Q9NPH9 171 aa17.72■□□□□ 0.43
CHRNA4-206ENST00000498043 VPS9D1Q9Y2B5 631 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms